1cc00c4cda5e6d81e7b60de12ba7f841 *CITATION
55678255d5d1a29fe1f008b3bca85c4b *DESCRIPTION
40b332d4eb1688a0f94e73d97b7ec78a *INDEX
90a5a361e2ee669454212a33abfb94be *LICENCE
c5d768c224687c01935e4ffd30408ad4 *Meta/Rd.rds
ed7ac26f4d6316c0aef77617577a0403 *Meta/data.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
6e2862381dd6038e78e637278086b067 *Meta/hsearch.rds
4b6304dce6b358ad6777bd160d9d22dd *Meta/links.rds
0c80a698c6b86b07ada51fe6e39b8904 *Meta/nsInfo.rds
f5e2a7c243addf1dc2d822a47599c96b *Meta/package.rds
33179893556f06cf6f615c7c4d9fff3b *Meta/vignette.rds
93404f1e03f601fc2c32d242d9e800d1 *NAMESPACE
c12d36dd28e1e039b5e59c0913566882 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DChIPRep
f01e753092518cf892ef3450e1232014 *R/DChIPRep.rdb
2692d710bc043bfcbedc5d7577cf52e1 *R/DChIPRep.rdx
586f4325fd5f9d00bdc71b4d7f6fa1f3 *REFERENCES.bib
e5e214f8b99b40434df19d29cd33afb1 *data/Rdata.rdb
58f14bf6562a9ada7a616b091d4f1814 *data/Rdata.rds
ab7b3c4b65c3958c9984194e6e2f3ccc *data/Rdata.rdx
4adbc252e9da501efa24eb046611c147 *doc/DChIPRepVignette.R
24a72c306e605cbd39036bfae1fd10d8 *doc/DChIPRepVignette.Rmd
8bf9f38419317b71a265f8dcff12c413 *doc/DChIPRepVignette.html
2c62f2a90a4071b2cba63fcc82ed9876 *doc/index.html
fc6b649812959489432dea8b79ad7e22 *exec/DChIPRep.py
e4cbd1b84aec42dc495e9d358efe38f9 *extdata/BY_conf_K4me3_1__ORF_count.txt
a244a49d9e54aa8b33ea9c27b449efd1 *extdata/BY_conf_K4me3_2__ORF_count.txt
134e18cf2217983319a9c803ae32b5f5 *extdata/BY_conf_K4me3_3__ORF_count.txt
636d9760c80f3c27e35cd6ff2c502258 *extdata/BY_conf_WCE_1__ORF_count.txt
f80e4077caea40ea668467cc7e59b265 *extdata/BY_conf_WCE_2__ORF_count.txt
f96ab7e83afba76b18115f904419dd09 *extdata/BY_conf_WCE_3__ORF_count.txt
e0dc223dd119ca6e67266500c7999ffb *extdata/SET2_conf_K4me3_1__ORF_count.txt
ec40d79f0c6939b792189c9dfaf624af *extdata/SET2_conf_K4me3_2__ORF_count.txt
f6e1b7e21960f9fd9a6320b005722313 *extdata/SET2_conf_K4me3_3__ORF_count.txt
8a337a7280a1db1f92bad381b2044335 *extdata/SET2_conf_WCE_1__ORF_count.txt
9e6d5210fbb010db3774d1801a610d09 *extdata/SET2_conf_WCE_2__ORF_count.txt
cc1bb67c22e74d69d2a39a24b0df884a *extdata/SET2_conf_WCE_3__ORF_count.txt
652dfe5e622f513c20f360878f7a28a7 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam
f0467a9f4563a5157f6e0443ab746d26 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam.bai
b7823fd346f023e863fd023e6b87611f *help/AnIndex
2ceb490171cfeb5d609fb776bba06c05 *help/DChIPRep.rdb
15b0e14a01c0850d6b317aa1fb887423 *help/DChIPRep.rdx
370386bab0a00ee7d45381394d6a8946 *help/aliases.rds
7f754319043fcbb73b20fd3d11bb0c77 *help/paths.rds
6ce77b699c8a461d8b2f5f2ed7554370 *html/00Index.html
baf937eff3e4c6cf000932f0a761f801 *html/DChIPRep.html
af8cf5b119cfadac417bd5b50fc6f3e3 *html/DChIPRepResults.html
eee95be18d6958d6f44ebee43b838ee7 *html/DESeq2Data.html
cb05e51de725d39477b034027f127c0c *html/FDRresults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a1dd681826a1b26733ebb2c43613ad83 *html/TSS_galonska.html
873975259770ccb0bde9551b0662d9e4 *html/chip_galonska.html
0d10ff91386587842bbb86da0e70a11c *html/exampleChipData.html
5d2dbd580211f383cf7cfe57f038dc16 *html/exampleInputData.html
32fa36325954bcfd45b49d3c67080960 *html/exampleSampleTable.html
ff24f788b6f95b2fd82606d5eb214427 *html/getMATfromDataFrame.html
c83a4810ab37ec7f06b01e6f813f7c45 *html/importData.html
4a59cb3d273587dd542b9cd839223a1f *html/importDataFromMatrices.html
dc02d68c8126316f654d1a6a4caa00f1 *html/importData_soGGi.html
2d101e5d7e57da05cd0890e65ee12a10 *html/input_galonska.html
92bcd856ef147087f086686b5ff5089f *html/plotProfiles.html
7d3821e277d18a98b53a1d7faa7a2833 *html/plotSignificance.html
23005ff976afc43872c37a6c584d0b1b *html/resultsDChIPRep.html
25ab0cc6acc24b4d88016f5fb43e8569 *html/robust_mean.html
934e6164f53d899a5dda2a278576cf15 *html/runTesting.html
eb5299ee2b6440b122453f0d34956c78 *html/sample_table_galonska.html
db342acdae34c672117d1a129f8c0e20 *html/show.html
da37f38cff499e01fa671269d9493972 *html/summarizeCountsPerPosition.html
ccc65e1ed10fbe935c45959a5588ec72 *html/testData.html
