013e29db7b8f2f651f2d153c8314a17e *CITATION
ff0807ce3766d466a6b0719a265c628f *DESCRIPTION
ead108cdb3e6b98a580d72616656a12d *INDEX
dfa7d19c907ef3f628f71863c61d5a87 *Meta/Rd.rds
39a49f44644154fe96d92bd860897144 *Meta/data.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
cfc1c1c11edea06be05f8b599fa324b9 *Meta/hsearch.rds
ed5b80c2dad8cbd4dbf117b4cbe2464a *Meta/links.rds
7951ebd2b1ffe74558c6d58f274cdeef *Meta/nsInfo.rds
8162ff3761797fe51ee91ebc8d5bdb2b *Meta/package.rds
883931efea40e98f0b99405c13f287c3 *Meta/vignette.rds
2ec3cc96db5f96a37ad08d576d570b45 *NAMESPACE
42d6a385046d47afa99c34f22156a2fb *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CellTrails
3d662b72da64716e38355e31aac10116 *R/CellTrails.rdb
840146e1ac22e54e674d1ecef7be93c6 *R/CellTrails.rdx
2836aaebd10baef67d8b7c92ffe49694 *data/exSCE.rda
3faabf899551585c0e7be36cb44a121a *doc/index.html
b1de54ca23821e29fcfe11014d4a89e4 *doc/vignette.R
5034a0645b4835293eb9ea3f238ca5a4 *doc/vignette.Rmd
b5bdfef2b4ca8f0b6c9854c04a35a515 *doc/vignette.pdf
237acfe6ed2b68fb20461e9cad365966 *exdata/bundle.graphml
410d25c55074bf766541d580f5e26bc1 *exdata/bundle.rds
eebf81955f5ef29cefe227b1322f0b85 *exdata/exSCE.graphml
19f3c5281ffc30827eca9741dbda08f2 *exdata/th2.rds
64d5fcdc198c10aa967591fb9d53b7a6 *help/AnIndex
d0c5407b50253373562cf873a0cd7b5b *help/CellTrails.rdb
06be4f41d6a30791be5be0eb5e12a5d6 *help/CellTrails.rdx
340556e0d337d2e5b86585c27418b9dd *help/aliases.rds
4f40e7817a929d083268d6674353cb58 *help/paths.rds
4871e9353d0810c52ba79ac5b2747081 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
931e6fd18c27c715645b8c8a87ef931a *html/addTrail.html
37c3f3faafe92a106d7742ef3e6c280b *html/connectStates.html
ced7d7a0dcba30782c434cd1a013476d *html/contrastTrailExpr.html
837090e21469d453d13f2236b6b6dc8a *html/embedSamples.html
2c02d122aadedda63f9d576f62782980 *html/enrichment.test.html
a5bd7c40b2a00c7147293461a796a4aa *html/exSCE.html
ec99ccfb9e6a7c8865ace8ee95f675ea *html/featureNames-SingleCellExperiment-method.html
4e2c99268947733b077e2105da0075c5 *html/filterTrajFeaturesByCOV.html
c13819f134d69f64615178dd19e91369 *html/filterTrajFeaturesByDL.html
5125e9fc5139ccf15f904c854b48fd89 *html/filterTrajFeaturesByFF.html
a9c3fa2a25ad44b89763476d8e0d0437 *html/findSpectrum.html
cf6349c0d912508a2620fe2c609af7fe *html/findStates.html
bc69987af36c8be838e6c9786ae96cca *html/fitDynamic.html
8ba6a88fab2722525d42e18e56cafdc7 *html/fitTrajectory.html
da73b0d3c171dc6cdd03e02396a2f943 *html/landmarks.html
5ac9492b2d2c3629ea5d0af803a7fb96 *html/latentSpace-set.html
206f0889e10a9bf0a3c6c38fd64e77af *html/latentSpace.html
e0d9cf6bb89462976b9aea7acbf78be8 *html/manifold2D-set.html
3a7b0e5580f10c3ad4164fac4a0e88fa *html/manifold2D.html
2e56463502244879d734c3f64a20d314 *html/pca.html
8ab881538eff4d18217775dd0ed96f6f *html/phenoNames.html
7ab14eb6ab3c626bb17da2fdbc50c89c *html/plotDynamic.html
8c520c22965d828191c555c4ce9ed044 *html/plotManifold.html
5b09e2d937596342025bff634cbad8e0 *html/plotMap.html
821a17926d7bc5ad7a9b69c7d662be42 *html/plotStateExpression.html
1b41557b9b37e4573603c043ca4e48d2 *html/plotStateSize.html
45cfd6cb528fb3ac6c7889ec8646a9b9 *html/plotStateTrajectory.html
11a829e0bb215491597103109e969250 *html/plotTrail.html
0b509d99654d0ec085a993c74a43986f *html/plotTrajectoryFit.html
c3c5677bc20cfd53fd5afd45a3dc09ce *html/read.ygraphml.html
b1d9c84533fef728c507037c83a00a82 *html/removeTrail.html
38bc62f3cd978c22feb90545603dafa3 *html/sampleNames-SingleCellExperiment-method.html
6054edb76177c3c487dbe42e1f1a0a4b *html/selectTrajectory.html
dac840d5c79b0ddcc636af7356c87d29 *html/showTrajInfo.html
84960eaf4da224f7ba3447e7262ee156 *html/simulate_exprs.html
222b5c4412d987a575afbca6238d8ea1 *html/stateTrajLayout-set.html
07cec0c19115ab5825d58607d969588f *html/states-set.html
80a4c6121961d455aa5b03c2136b85ca *html/states.html
5d78c52298a1fefb25aa0a6e74a6e70e *html/trailNames-set.html
54293e40219bccd3368480fea53eec1b *html/trailNames.html
aebd8d0183c3a9fc38561b8db9144963 *html/trails.html
4fe1ae9b8f9e5763aab43b1b85bd3e14 *html/trajComponents.html
8ed8b6ce996d14ede8399aa7c5f78bec *html/trajFeatureNames-set.html
c0cb6673b8658b4e322144ce471aebef *html/trajFeatureNames.html
feb76bc0f19aaefe452bc06b24da74eb *html/trajLayout-set.html
931fe725eda45e66ecd4bf3800acfcb2 *html/trajLayout.html
435769f989136f7f04ae36b2524fa04c *html/trajResiduals.html
0e9c81a2bbf72af1fe6e9869b695f12e *html/trajSampleNames.html
2375fb943aceb2c20844f3598e926f50 *html/userLandmarks-set.html
16da2f84517c2bfaeb14107d902081b3 *html/userLandmarks.html
602328938b4502353b623503cf106224 *html/write.ygraphml.html
2ca4999b950fe68d7395743ab796391d *scripts/make-data.R
adc1ef1ccc95f776a02fb10ae3eded15 *unitTests/test_addTrail.R
172ff435c36ae74abe46a4e8e1c5849b *unitTests/test_connectStates.R
4a624243fc8505c00a154190097cfd61 *unitTests/test_embedSamples.R
5ea251a23dd9db5dbb4518ba170cdd5f *unitTests/test_findSpectrum.R
4787f20a747b91fdbc1f3a8471d61dd7 *unitTests/test_findStates.R
188e4bdaa0a7ff46a8d5a54f0bb1373c *unitTests/test_fitDynamic.R
339907a9da89cb8b2fa28f2da75dfb3b *unitTests/test_fitTrajectory.R
60268a30a40c20cabbbdcebf954d5331 *unitTests/test_phenoNames.R
68056140f9f53837ce04450dc586347b *unitTests/test_plotDynamic.R
4eddcc292e90b99daf688ad223af818b *unitTests/test_plotManifold.R
1fe997bf1c6b9b5d66c0d6e311ca6236 *unitTests/test_plotMap.R
81a69b47d127e1a676e9d414cae7ac1d *unitTests/test_plotStateExpression.R
6254311d3afa8a6b6610f3c7f84150f3 *unitTests/test_plotStateSize.R
5d90e92b6df9af1c367a3f38955f1e0d *unitTests/test_plotStateTrajectory.R
248bcfa4e7f93aa84963c5f055957960 *unitTests/test_plotTrail.R
65b0f836fe1150ec1e9d7a5af0347361 *unitTests/test_plotTrajectoryFit.R
d662d1a8362f4f8ba7133be59c7e12ed *unitTests/test_userLandmarks.R
8480fc23f20afc4812da1cc60ff8c317 *unitTests/test_workflow_logic.R
