82c00b01afab8cc7247470e55d2775e7 *CITATION
1f0d4c70d4bde46d9f8a2a8bff0e0cdc *DESCRIPTION
7cba324e068e87cb387ecfb23ef44ab7 *INDEX
8f80a6f122963ad850cbb683d5d09c5c *Meta/Rd.rds
598e05906c76ceab0d9ec8ecaf8877bc *Meta/features.rds
5822db0b175fc855a52a905e3d44c808 *Meta/hsearch.rds
cbf91c66d4f393f69bd2bd6904396acb *Meta/links.rds
a60631f79ebdb3b60074c207f24c9515 *Meta/nsInfo.rds
2a584e84431bc39b1009c0a566cc4177 *Meta/package.rds
6de4073c84e39e5594225d62e08b86c4 *Meta/vignette.rds
fb2f09a9ac778560823fe610bc127c50 *NAMESPACE
50bf515341fb7350db3cb7849d9fdf35 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CHRONOS
07e83e4e979f05f8c074d70ed016b23f *R/CHRONOS.rdb
e85331881e072c33db07c11473d6bb8a *R/CHRONOS.rdx
397602b565a494a6baef4802e8f2a069 *doc/CHRONOS.R
7cbdd0127ad5f77a0ee7c6ee3b48063a *doc/CHRONOS.Rmd
b6566f3f39236dc759bab35bbdec00f1 *doc/CHRONOS.pdf
f9260aa5f28bca1bcb77cbf2f18f4926 *doc/index.html
8d1c8068f1e84c53b28cbe095f4801f5 *extdata/Downloads/KEGG/hsa/hsa04915.xml
40ef2ba0fbdc3b2a3a78eddadb990099 *extdata/Downloads/KEGG/hsa/hsa04917.xml
bd05b84234ad3f33ae6ea7516c7f4f97 *extdata/Downloads/KEGG/hsa/hsa04930.xml
263f5c1323dd479aa9781f0455f831ca *extdata/Downloads/KEGG/hsa/hsa05031.xml
5c86930303076b56fffb2124659ee722 *extdata/Downloads/mirbase/miRNAmaps_cel.RData
a0cb7ea78b15e55988d9ac247456bcbe *extdata/Downloads/mirbase/miRNAmaps_cfa.RData
20656607818c5a6e0f0999336c998947 *extdata/Downloads/mirbase/miRNAmaps_dme.RData
6ac71ed83a95d7c3be06257ba71cfe4c *extdata/Downloads/mirbase/miRNAmaps_dre.RData
d801f193d9043e618fc4db0cd5a12bab *extdata/Downloads/mirbase/miRNAmaps_gga.RData
848308837e8a4b8c8c9dda5b2b3b0338 *extdata/Downloads/mirbase/miRNAmaps_hsa.RData
f26276ab1d447631f168ed71619f0300 *extdata/Downloads/mirbase/miRNAmaps_mmu.RData
d886c18f5539936ff080e8a078f91513 *extdata/Downloads/mirbase/miRNAmaps_oar.RData
61f80721ee625b915c5e278e32f1878d *extdata/Downloads/mirbase/miRNAmaps_rno.RData
ba0338a0619071b90c76159b19b7dda0 *extdata/Examples/data.RData
8d1c8068f1e84c53b28cbe095f4801f5 *extdata/Examples/kgml/hsa04915.xml
40ef2ba0fbdc3b2a3a78eddadb990099 *extdata/Examples/kgml/hsa04917.xml
bd05b84234ad3f33ae6ea7516c7f4f97 *extdata/Examples/kgml/hsa04930.xml
263f5c1323dd479aa9781f0455f831ca *extdata/Examples/kgml/hsa05031.xml
80be6b7034da70420088ae883e122025 *extdata/User/TarBase.xlsx
b73847dc20f74e19d50f266e54a900a9 *extdata/User/interestingGenes.txt
f5bd80c56bd4310f22a950f561b4db72 *extdata/User/mRNAexpressions.txt
6209f09eb733f87ac17256483bfcef3a *extdata/User/miRNAexpressions.txt
6da5e89fa7bb7b55bef94a3f3fbeb067 *extdata/User/miRecords.xlsx
67b9999ac058bfbe67206f9d90700dbe *help/AnIndex
0314726bec606a7650c0b222a5d5cbe0 *help/CHRONOS.rdb
ea6bfed0293aa1e2b3e0bd9d203d4fe8 *help/CHRONOS.rdx
bbcdf1fcef18e7ac05e6994c0da191d5 *help/aliases.rds
805f5f0b8e706eb888913ef3118bed38 *help/paths.rds
04acb30ebfa8012a82a56a7ed3a711bc *html/00Index.html
53214e97feefab642d5f0ef43343499e *html/CHRONOSrun.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a82df2b3434382fb9b13f3b9716726cc *html/convertMiRNANomenclature.html
ac49d10a02fd5a310fd1f9ba3d86d565 *html/convertNomenclature.html
c5dad0c4a832c5be313ff363e6cb6c16 *html/createPathwayGraphs.html
af749260e2e36064048c8198954f0164 *html/downloadKEGGPathwayList.html
06679f08e0b7db44bbd4364eb45a9a07 *html/downloadMiRecords.html
20a12e78d1cd2176efe947364acf7f95 *html/downloadPathways.html
c54f50de19d472e9561655e3e4582efb *html/extractLinearSubpathways.html
e6a6a3f355fb006c0a1419cca3d522c6 *html/extractNonLinearSubpathways.html
0ec33ab2bdf3c82468b67a840377b729 *html/getEdgeTypes.html
0cc8d1eba829a918e9ce9abb3a3ad13d *html/importExpressions.html
800a54b4d88a6d96fc59894026c2e207 *html/pathwayMeasures.html
43826de516445582070aa8a27ab392a6 *html/scoreSubpathways.html
2d8ffcf5069ad962801a7f3ba1d829cb *html/subpathwayKEGGmap.html
af6719601166fe8cb5acc62964f00854 *html/subpathwayMiRNAs.html
b587688e235ebb232007ff30bb5de759 *html/visualizeResults.html
4618e85cf7e05a7a8a825e6203258c4d *java/CHRONOS.jar
f26364f968916f546b7b86cf122f27c3 *unitTests/test_CHRONOSrun.R
4f7aefd3040ac2c26db999d47096f53d *unitTests/test_pathwayToGraph.R
3d1e948699f5b4b9d0c25fa99afce3c6 *unitTests/test_subExtractionLinear.R
b5a2804bef03d6cca7315e983cd6852d *unitTests/test_subExtractionNonLinear.R
8c9ceaeb0876827e50e9468aadb3f67b *unitTests/test_subRefinement.R
3100a07ec828065bfc818a701ef293e3 *unitTests/test_subVisualization.R
