ba0946beb09e0a2b3655cd54c7b1542b *DESCRIPTION
91d413d5150ec06f174978545498270d *INDEX
7316cbd9c41e1aa58c1ce11786576b80 *Meta/Rd.rds
1b8dc38262cd8f81b88d57b3004cc096 *Meta/data.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
f00d6c204a595be6bf14991853d1bd65 *Meta/hsearch.rds
129dd73f7e9f8948bc6a6aae74f0784f *Meta/links.rds
ce2b5cb2387c589a527cc5075bc8515d *Meta/nsInfo.rds
eb400290598a2be3cd3dca613d2d5adb *Meta/package.rds
77ba049a0ca53e9330ecf2be45ff5556 *Meta/vignette.rds
ae59b8a6e95d660b2b63a851c68911a9 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/Basic4Cseq
23298b7a37f1e2b9083d837833959d5b *R/Basic4Cseq.rdb
4ed19966f09f3a17e66d35cd148cce6d *R/Basic4Cseq.rdx
371a0994c3f3c2931aed600ac0183fde *data/liverData.RData
ba5c985bdae524e41b9b8a24d0cebb38 *data/liverDataRaw.RData
cb12cab230a19f7373dab080cd9dfade *doc/index.html
0cded5c665295c5748d19bad3ffdd592 *doc/vignette.R
67392a702c2453b846903e0c1a42e6c0 *doc/vignette.Rnw
50c1cda92b4a18671ac318a0cdecddd7 *doc/vignette.pdf
b90cc5bc0dca1138debae1179cb813f8 *extdata/RCircos_GRCm38_ideogram.csv
6cbaecaf4ed2293298343bfce751c258 *extdata/RCircos_HG19_ideogram.csv
00c1d1d92fa3a07f3403a5c039f899c7 *extdata/enzymeData.csv
6332710cc1a1ee8ef40cb95538a94929 *extdata/fetalLiverCutter.sam
4f671ebe3f1c6dc00177f7d50b8944df *extdata/fetalLiverShort.bam
614b15a01e9f8d0bd62458ec969845c7 *extdata/fetalLiverVP.bed
ab13942a15e17712f182b3b1c1e0363a *extdata/fetalLiver_finalFragments.csv
a3e529247e47214266dd2a252dfb039b *extdata/transInteractionData.txt
d39a2c0c80702059da9c6f99ae18a212 *extdata/veryShortExample.fastq
a80e603e40f7343b0bb97c1380df61c8 *extdata/veryShortLib.csv
e9e6b8add27c84f481a1839f9db793d1 *extdata/veryShortReference.fasta
ac34dfc4f22e37a2a286f31ddf7ecceb *extdata/veryShortReference.fasta.amb
06d4a319a43ef8e7bf7f0090e14e6433 *extdata/veryShortReference.fasta.ann
88c3629f9b4134224e100e04d1fcc251 *extdata/veryShortReference.fasta.bwt
cfc9149681143ca9aff12fe0842e34d1 *extdata/veryShortReference.fasta.pac
3748a2acac76bf91845f10bd7df8dabb *extdata/veryShortReference.fasta.sa
e914f0f7d046dc7494eeb2e2d3348ed2 *extdata/vfl_aagctt_catg_mm9_54_vp.csv
cb8113f292b6668dd86d61425d18203a *help/AnIndex
4e2c90d910c98946fe4720f7220ce35e *help/Basic4Cseq.rdb
e10d1ea1ea925c8ec6b167aaf0b9f1f0 *help/Basic4Cseq.rdx
665468fbdae3b887c9c069c9405316ee *help/aliases.rds
610a2cd91300e5a3c5f8aadaab9e29ec *help/paths.rds
cf9a3d5d260ff0e9911eb8d035966eaf *html/00Index.html
2ad69f9a95f4e97b2d9f8f62c77bd6e8 *html/Data4Cseq-class.html
61dd8ba0d6ccfad9573c609d77bd61f5 *html/Data4Cseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
b38778915c42a8424aa8235b9f28bae6 *html/checkRestrictionEnzymeSequence.html
cde6960d665b3d1ebbd90d8630cdf22d *html/chooseNearCisFragments.html
8d7e28d70cdbe748ef168ab115b4c183 *html/createVirtualFragmentLibrary.html
b306408d377cce57713bc225b4311817 *html/drawDigestionFragmentHistogram.html
b8f357e8acec2d1127e197c138ea838c *html/drawHeatmap.html
4a711595840a0e4e311d2e95c928e5b4 *html/exportVisualizationFragmentData.html
f3cb5aabd0fa09bb0685caffbd97f61b *html/getReadDistribution.html
d105431e200f618d313da10ebff639bf *html/giveEnzymeSequence.html
4ac3442bd520a47cf3513d0e6e84573a *html/importVisualizationFragmentData.html
1d0275072d1103f37a5ba45ecdb54af1 *html/liverData.html
c6bbd61daf93d53d9acdc936ead4b219 *html/liverDataRaw.html
e4801b542452eab2623fe2c1d47888b0 *html/normalizeFragmentData.html
d9a827681f1a93c7f3006a1e6eb4f9e7 *html/plotTransInteractions.html
e33a52023984d18e3b8428f9a395daae *html/prepare4CseqData.html
0ee5f24cad83df9b8019556d6a96768f *html/printBEDFragmentLibrary.html
e7ad2674f782db726f82b5c529841b5d *html/printWigFile.html
d4d2ea611dcf669d5a0982b76997726c *html/readPointsOfInterestFile.html
085f10920827182f266f570e9008d5dc *html/readsToFragments.html
ae360f78d979c07f6dc46cb0aac85958 *html/simulateDigestion.html
daabbf5e03f153c552c7cf744ba3b40f *html/visualizeViewpoint.html
