| getSampleIDs {ALDEx2} | R Documentation |
Returns the names of the samples for an aldex.clr object. These can be used to access the original reads, as in reads\$sampleID (if the reads are a data frame).
getSampleIDs(.object)
.object |
A |
Returns the names of the samples. These can be used to access the original reads, as in reads\$sampleID (if the reads are a data frame).
A vector of sample names.
aldex.clr
data(selex)
#subset for efficiency
selex <- selex[1201:1600,]
conds <- c(rep("NS", 7), rep("S", 7))
x <- aldex.clr(selex, conds, mc.samples = 2, denom = "all", verbose = FALSE)
sampleIDs <- getSampleIDs(x)