Signet-class            An S4 class to represent a pathway and the
                        results of the associated simulated annealing
                        run.
SignetList-class        An S4 class to represent a list of "Signet"
                        objects.
kegg_human              Pathway examples. See
                        'browseVignettes("signet")' to see how to
                        prepare the pathways for running simulated
                        annealing.
nullDist                Null distribution
scores                  Example of gene selection scores.
searchSubnet            Search for a high scoring subnetwork
signet                  Selection Inference in Gene NETworks
testSubnet              Test the significance of high-scoring
                        subnetworks found using simulated annealing.
writeXGMML              Write Cytoscape input file
