R: Plot flowcell intensity by base and cycle

plotIntensity {savR}

R Documentation

Plot flowcell intensity by base and cycle

Description

Draws a representation of a flowcell, showing the average corrected called intensity values.

Usage

plotIntensity(project, cycle, base)

## S4 method for signature 'savProject,integer,character'
plotIntensity(project, cycle = 1L,
  base = c("A", "C", "G", "T"))

## S4 method for signature 'savProject,missing,missing'
plotIntensity(project)

## S4 method for signature 'savProject,integer,missing'
plotIntensity(project, cycle)

## S4 method for signature 'savProject,missing,character'
plotIntensity(project, base)

Arguments

`project`	A savProject-class object
`cycle`	integer cycle number
`base`	character for nucleotide

[Package savR version 1.18.0 Index]