goPatt {restfulSE} | R Documentation

## Create a data.frame with ENSEMBL and SYMBOL identifiers associated with a GO TERM specified by a regular expression in `termPattern`

### Description

Create a data.frame with ENSEMBL and SYMBOL identifiers associated with a GO TERM specified by a regular expression in `termPattern`

### Usage

    goPatt(termPattern = "neurotro", targets = c("ENSEMBL", "SYMBOL"),
      organism = "Hs", inst = "eg")

### Arguments

`termPattern` | a character string encoding a regular expression to be matched to keys of type TERM in GO.db
`targets` | `columns` to be returned from org.[organism].[inst].db
`organism` | two-letter code for organism in the OrgDb family of packages
`inst` | two- or three-letter code (e.g., `eg` for ENTREZ GENE or `sgd` for yeastgenome.org) identifying institute responsible for annotation

### Value

data.frame

### Examples

    gp = goPatt()
    dim(gp)
    head(gp)

[Package restfulSE version 1.2.3 Index]