R: Write a SomaLogic sample submission form

writeSampleSubmissionForm {readat}

R Documentation

Write a SomaLogic sample submission form

Description

Writes a SomaLogic sample submission form to Excel XLSX file.

Usage

writeSampleSubmissionForm(submission, outdir = ".")

Arguments

`submission`	A `data.frame` created by `createSampleSubmission`.
`outdir`	A string denoting the path to the directory where the output file should be written.

Value

The name of the XLSX file is invisibly returned, but the function is mostly called for the side effect of writing this file.

Examples

# Import the input files
withr::with_dir(
  system.file("extdata", package = "readat"),
  {
    slides <- readSlides()
    controls <- readControls()
    comments <- readComments()
    samples <- readSamples()
  }
)

# Create the sample submission form and write to Excel spreadsheet
submission <- createSampleSubmission(
  slides, controls, comments, samples,
  studyName = "Taheri01", studyId = "WCQ-16-002"
)
writeSampleSubmissionForm(submission, tempdir())