graph {perturbatr} | R Documentation

## Getter for graph used for network diffusion

### Description

Returns the graph that has been used for analysis using network diffusion.

### Usage

    graph(obj)

    ## S4 method for signature 'NetworkAnalysedPerturbationData'
    graph(obj)

### Arguments

`obj` | the object for which you want to extract the underlying graph

### Value

returns a `igraph` object

### Examples

     data(rnaiscreen)
     ft <- hm(rnaiscreen)

     gr <- readRDS(system.file(
       "extdata", "graph_small.rds", package = "perturbatr"))
     diffu <- diffuse(ft, gr, r=1)

     graph(diffu)

[Package perturbatr version 1.0.0 Index]