getShortestPathSif {paxtoolsr} | R Documentation

## Get the shortest between two IDs (HGNC or CHEBI)

### Description

Get the shortest between two IDs (HGNC or CHEBI)

### Usage

    getShortestPathSif(sif, idA, idB, mode = c("all", "out", "in"),
      weights = NULL, filterFun, ...)

### Arguments

`sif` | a SIF network
`idA` | HGNC or CHEBI (CHEBI:XXXXX) ID
`idB` | HGNC or CHEBI (CHEBI:XXXXX) ID
`mode` | see shortest_paths() in igraph
`weights` | see shortest_paths() in igraph
`filterFun` | a function to filter multiple paths of the same length
`...` | additional arguments passed on to filterFun

### Value

a data.frame representing a SIF network

[Package paxtoolsr version 1.14.0 Index]