load.bs.genome {metaseqR} | R Documentation

## Loads (or downloads) the required BSGenome package

### Description

Retrieves the required BSgenome package when the annotation source is `"ucsc"` or `"refseq"`. These packages are required in order to estimate the GC-content of the retrieved genes from UCSC or RefSeq.

### Usage

        load.bs.genome(org)

### Arguments

`org` | one of `metaseqr` supported organisms.

### Value

A proper BSgenome package name.

### Author(s)

Panagiotis Moulos

### Examples

    bs.obj <- load.bs.genome("mm9")

[Package metaseqR version 1.20.0 Index]