pathway_summary {mdp} | R Documentation

## print pathways generates a summary plot for pathways and sample score plot of best gene set

### Description

print pathways generates a summary plot for pathways and sample score plot of best gene set

### Usage

    pathway_summary(sample_results, path, file_name, control_samples, control_lab)

### Arguments

`sample_results` | list of sample scores for each geneset
`path` | directory to save images
`file_name` | name of saved imaged
`control_samples` | list of control sample names
`control_lab` | label that specifies control class

### Value

data frame of signal to noise ratio of control vc test sample scores for each pathway

[Package mdp version 1.0.0 Index]