Package: iSEE
Title: Interactive SummarizedExperiment Explorer
Version: 1.0.1
Date: 2018-05-02
Authors@R: c(person("Charlotte", "Soneson", role=c("aut", "cre"),
    email="charlottesoneson@gmail.com"), person("Aaron", "Lun", 
    role="aut", email="alun@wehi.edu.au"), person("Federico",
    "Marini", role="aut", email="marinif@uni-mainz.de"), 
    person("Kevin", "Rue-Albrecht", role = "aut",
    email = "kevin.rue-albrecht@kennedy.ox.ac.uk"))
Maintainer: Federico Marini <marinif@uni-mainz.de>
Description: Provides functions for creating an interactive 
    Shiny-based graphical user interface for exploring data 
    stored in SummarizedExperiment objects, including row- and
    column-level metadata. Particular attention is given to 
    single-cell data in a SingleCellExperiment object with 
    visualization of dimensionality reduction results.
Depends: R (>= 3.5), SummarizedExperiment, SingleCellExperiment
Imports: methods, BiocGenerics, S4Vectors, utils, stats, shiny,
        shinydashboard, shinyAce, shinyjs, DT, rintrojs, ggplot2,
        colourpicker, igraph, vipor, mgcv, reshape2, rentrez,
        AnnotationDbi, graphics, grDevices, viridisLite, cowplot,
        scales, dplyr
Suggests: testthat, BiocStyle, knitr, rmarkdown, scRNAseq, scater,
        Rtsne, irlba, RColorBrewer, viridis, org.Mm.eg.db, htmltools
Enhances: ExperimentHub
URL: https://github.com/csoneson/iSEE
BugReports: https://github.com/csoneson/iSEE/issues
biocViews: Visualization, GUI, DimensionReduction, FeatureExtraction,
        Clustering, Transcription, GeneExpression, Transcriptomics,
        SingleCell, CellBasedAssays
License: MIT + file LICENSE
VignetteBuilder: knitr
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2018-05-04 07:32:03 UTC; biocbuild
Author: Charlotte Soneson [aut, cre],
  Aaron Lun [aut],
  Federico Marini [aut],
  Kevin Rue-Albrecht [aut]
Built: R 3.5.0; ; 2018-05-04 15:53:38 UTC; windows
