Class "VEGASResult"

Description

Objects of this class store results from running VEGAS.

Objects from the Class

Objects can be created by calls of vegas.

Slots

geneSetName:

Object of class "character", the name of the geneSet

pValue:

Object of class "numeric", the p-value

degreesOfFreedom:

Object of class "integer", the degrees of freedom used to calculate the p-value

statistic:

Object of class "numeric", the test statistic for the set

simulatedStats:

Object of class "vector", the simulated statistics for the set used to calculate the p-value

Methods

No methods defined with class "VEGASResult" in the signature.

Accessors

In the code snippets below, object is a VEGASResult object.

geneSetName(object):

The name of the gene set.

pValue(object):

A numeric p-value.

degreesOfFreedom(object):

Integer value of the degrees of freedom used in the statistical test.

statistic(object):

A numeric value corresponding to the statistic calculated from the test performed.

Author(s)

Caitlin McHugh

See Also

VEGASResultCollection, GLOSSIResult

Examples

showClass("VEGASResult")