94c66cd435684ab791a552686a4d362d *DESCRIPTION
9f2ac2d2dd49d3d9bc3741a904441862 *INDEX
44ca510b93a7391ff6c46d11849673f7 *Meta/Rd.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
032b77ee889e347ab7fc2bb3a952a9c7 *Meta/hsearch.rds
126167f0b08a38411d6452a5530c4b9f *Meta/links.rds
1430af7b11301ab41a1a0cc84d00b514 *Meta/nsInfo.rds
b37b4833596fda33606c87db71f034cf *Meta/package.rds
f1fdef0a45914337299b421ef90f9a9e *Meta/vignette.rds
7e3da990014f52ce3954dbd8a460f192 *NAMESPACE
dd6be23167e8b793ac67c79c001ad3e7 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/cobindR
ff6e4b0caee305c7a83829e31adac1bd *R/cobindR.rdb
9999c1b9f6d792a649341dc1002432ae *R/cobindR.rdx
ded51f71ec4570726e53717786f79c40 *doc/cobindR.R
496990aaee83d98ebd2a166ebf4593bc *doc/cobindR.Rnw
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39be6d459717859da6cda86dcf79ceb1 *extdata/config_default.yml
11654be8f877d9f1dcf4050a7d6e2046 *extdata/example.fasta
2c46ba771fab025d9caa0c6f5d4ad8ba *extdata/pfms/myod.tfpfm
ee0c1768d0850b04bf7dd4279f23bfff *extdata/pfms/soxoctklf.tfpfm
96a7c45735d76974e4c96bd5ddd4d987 *extdata/sox_oct_example_vignette_seqs.fasta
043b0ae785ff9dd7f9ba9cc6e00866de *extdata/ucsc_example_ItemRGBDemo.bed
48119dc94fcce51bfedadd539ac00b8c *help/AnIndex
a663fff33ee2aa1ab4a0b08800506c65 *help/aliases.rds
e907cf27fff5be130079ff8577f50453 *help/cobindR.rdb
fc0a35e17a59d5ea6f0d158dcd3d5d58 *help/cobindR.rdx
ce360a9e3f8f62df49619a2cd5e028b1 *help/paths.rds
d4d43802b6e30305a1f48dbf2c9e8c94 *html/00Index.html
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5a76c7f2b5ac8c4672569881074e3312 *html/SeqObj-class.html
9d7934814358c9b15f6ced67bf2c799f *html/bg_binding_sites.html
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17a53eb8c3117cdcab32f00c60dbefbc *html/bg_sequences.html
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ef7fe19b1ee3cf46502ac048dadb3414 *html/configuration.html
2244df6a70ac382d2a5eaae9829b68a2 *html/downstream.html
f9dcc68408824ec54990fae84be2d7bf *html/experiment_description.html
abdea58ba957d58dc4dfaefc015ef128 *html/fdrThreshold.html
0522410645c0815d5197ea9b928839a1 *html/find.pairs.html
498215812c4ff23c18d676455f15935e *html/get.bindingsite.ranges.html
f76b755d499f3c27798f2cf6dacaa928 *html/get.pairs.html
c5b6dff01cc7bc84795ff919810d6d2c *html/get.significant.pairs.html
75497ef9a7c0783513def2914bfb2992 *html/id.html
4044e7ba503c6c7bf2832335c506abc2 *html/location.html
64e64c33cb24a780706420fbd4f8546e *html/mart.html
b3a2c058b5a357f0356e909c65545aaf *html/max_distance.html
7ae0c95a6abd4d1a78bce0d549607c51 *html/name.html
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abeaa61e682b6d391eba429a0381f233 *html/pairs.html
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2be20e4ff51fbc85bf785220c76ac496 *html/path.html
5c04739328c0409d6868acb18a801fdc *html/pfm.html
6764db883054130aead5dad6a86f4309 *html/pfm_path.html
e6bda5bb98ae4b79a9b85ce3a3e75e4f *html/plot.detrending.html
9927cf965c6956b00a0bf2e3f8d832b6 *html/plot.gc.html
a9357d93950489832deb6e40dbc101d4 *html/plot.pairdistance.html
4d8f02a1bcdc97faaa1ca564c5e0ff7a *html/plot.pairdistribution.html
8395e3b8484a21cf0b5fd136f9e3fc56 *html/plot.positionprofile.html
8185a1ed5abc0b31d13cd0564be1d135 *html/plot.positions.html
1527bd0fadf5bf9e3ed3fcb0d6de5045 *html/plot.positions.simple.html
d3b27c07eb865a499781272f51a12cc5 *html/plot.tfbs.heatmap.html
8fcb105a13250b56a0f5d1c03d249e67 *html/plot.tfbs.venndiagram.html
75fa44462b0b87bfbf49d5bfcb6e8030 *html/plot.tfbslogo.html
bbfe524c1a083d4911d65618f1dbcf0f *html/predicted2pwm.html
b4cc1a3d862061f087f34c9428554a0e *html/pseudocount.html
278d343f60fefbf7a1fa92f1cc1bf2e7 *html/rtfbs.html
d2a9d9b254614bf82601e900f2cb912b *html/search.gadem.html
3feefd6b38e83f5774194ac644c1a593 *html/search.pwm.html
b5e7b202af96585d25b1a6815ad621de *html/seqObj.html
fb7cb733af7936818c577df7db09aa6a *html/sequence.html
85eeac2b40408e3d41135d30cda72fe4 *html/sequence_origin.html
698e370cb6688d83648b9bd86f8311ff *html/sequence_source.html
c78232e25ec98eac7fddb92f90f86af2 *html/sequence_type.html
6505ff9dcfc9405b1fb2a411c5ba0d94 *html/sequences.html
3fcbed36548396f1859a9303d4c96171 *html/species.html
01709ea942b9dccd9fcb5612b541d70b *html/testCpG.html
fb324ee335555289210637297e279322 *html/threshold.html
27238416a1bcdda0956b103e60bf4b40 *html/uid.html
380913e1d56cd8590764f762d62ffb3c *html/upstream.html
dcb5955c5230ac5f9ff64f75826a8d24 *html/write.bindingsites.html
5660305677be0695e7dc365c926ce893 *html/write.bindingsites.table.html
65a62ce8699deb0eb88fa7936afef52f *html/write.pairs.html
11b4bc3496de805859f883928d745487 *html/write.sequences.html
b4211ebec6d576c6ab65ba3550d06864 *unitTests/runit-cobindR.R
c60cdccdabfc9bd25185e628114f7ae0 *unitTests/runit-configuration.R
