GE_matrix               Get human KEGG pathway data and a gene
                        expression matrix in order to obtain a matrix
                        with the gene expression for only pathways
                        given in input .
IPPI                    Multilayer analysis Cava et al. BMC Genomics
                        2017
SelectedSample          Select the class of TCGA data
StarBioTrek             Download data
average                 For TCGA data get human pathway data and
                        creates a matrix with the average of genes for
                        each pathway.
ds_score_crtlk          For TCGA data get human pathway data and
                        creates a measure of discriminating score among
                        pathways
euc_dist_crtlk          For TCGA data get human pathway data and
                        creates a measure of cross-talk among pathways
getKEGGdata             Get human KEGG pathway data.
getNETdata              Get network data.
list_path_net           Get human KEGG pathway data and output of
                        path_net in order to define the common genes.
matrix_plot             Get human KEGG pathway data and a gene
                        expression matrix in order to obtain a matrix
                        with the mean gene expression for only pathways
                        given in input .
path_net                Get human KEGG pathway data and network data in
                        order to define the common gene.
plotting_cross_talk     Get human KEGG pathway data and a gene
                        expression matrix we obtain a matrix with the
                        gene expression for only pathways given in
                        input .
proc_path               Get human KEGG pathway data.
process_matrix          Process matrix TCGA data after the selection of
                        pairwise pathway
select_class            Select the class of TCGA data
st_dv                   For TCGA data get human pathway data and
                        creates a measure of standard deviations among
                        pathways
svm_classification      SVM classification for each feature
