get_homologs {STRINGdb} | R Documentation

## get_homologs

### Description

Returns the homologs of the given input identifiers that are present in the given target_species_id.

### Usage

    ## S4 method for signature 'STRINGdb'
    get_homologs(string_ids, target_species_id, bitscore_threshold=NULL)

### Arguments

`string_ids` | a vector of STRING identifiers.
`target_species_id` | NCBI taxonomy identifier of the species to query for homologs (the species must be present in the STRING database)
`bitscore_threshold` | threshold on the bitscore of the blast alignment.

### Value

Data frame containing the homologs of the given input identifiers and that are present in the given target_species_id.

### Author(s)

Andrea Franceschini

[Package STRINGdb version 1.20.0 Index]