| reads_demo_01 {RJMCMCNucleosomes} | R Documentation |
GRanges format
(for demo purpose).A group of forward and reverse reads, in a GRanges, that can be
used to test the rjmcmc function.
data(reads_demo_01)
A GRanges containing forward and reverse reads.
A GRanges containing forward and reverse reads.
rjmcmc for profiling of nucleosome positions
## Loading dataset
data(reads_demo_01)
## Nucleosome positioning
rjmcmc(reads = reads_demo_01, nbrIterations = 100, lambda = 3, kMax = 30,
minInterval = 146, maxInterval = 292, minReads = 5)