Merge nucleosome information from all RDS files present in a same directory. Beware that only nucleosome information from same chromosome should be merged together.

Description

Merge nucleosome information, from all RDS files present in a same directory, into one object of class "rjmcmcNucleosomesMerge".

Usage

mergeAllRDSFilesFromDirectory(directory)

Arguments

Value

a list of class "rjmcmcNucleosomesMerge" containing:

• k a integer, the number of nucleosomes.

• mu a GRanges containing the positions of the nucleosomes.

Author(s)

Pascal Belleau, Astrid Deschenes

Examples

## Use a directory present in the RJMCMC package
directoryWithRDSFiles <- system.file("extdata",
package = "RJMCMCNucleosomes")

## Merge nucleosomes info from RDS files present in directory
## It is assumed that all files present in the directory are nucleosomes
## result for the same chromosome
result <- mergeAllRDSFilesFromDirectory(directoryWithRDSFiles)

## Print the number and the position of the nucleosomes
result$k
result$mu

## Class of the output object
class(result)