| getStudiesWithSpecificAssayData {RImmPort} | R Documentation |
Get a list of studies that have specific assay type data
getStudiesWithSpecificAssayData(assay_type, all_study_ids = c("ALL"))
assay_type |
Assay Type |
all_study_ids |
List of study indentifiers to search on |
List of study indentifiers
library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
study_ids <- getStudiesWithSpecificAssayData("ELISPOT")