d899626bfdd384dd91c8b8199e8faa4f *CITATION
531d8f4f38f6473802090d9a092d090d *DESCRIPTION
e8590c21ca5e59f97ba8a4f64e4ddec0 *INDEX
edfeda07a1aa039fc30b8c220c99fb10 *Meta/Rd.rds
59078cbd89a97fa940d1f64d485ea04a *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
0f5954f6d68c8837cc01ef6de809e786 *Meta/hsearch.rds
b1efa65a12611521120c3fe7bb7f98f4 *Meta/links.rds
329da1dfd5f87676ebdecec1e59d73f9 *Meta/nsInfo.rds
265a498ecfc849488ed4f86eac0fcaf1 *Meta/package.rds
cb9045ff9f50de681dd067ed0aa42378 *Meta/vignette.rds
49ac124b0d4a80bf7dc47b79715e3f68 *NAMESPACE
c37a4f5f2a74fcbf3abf08197ae6ad4b *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/RCAS
26b8d213aa164a3a50365d65d378c77b *R/RCAS.rdb
f75f08de49e125a54208754a0ef7a6c2 *R/RCAS.rdx
78c397280122dfd8c5a5ec226d5a8d13 *data/Rdata.rdb
d9c600e6f2a9c11aed28346f1ea96e4f *data/Rdata.rds
06c7422738f609a2881dbb8da205d6ea *data/Rdata.rdx
2c0fc3deefcbcf2a786efa6d7b56e189 *data/datalist
2077b16a28c9acba8e80be8fb64ee38e *doc/RCAS.metaAnalysis.vignette.R
fe54a2d6bc82f877aea6d5309fd7b999 *doc/RCAS.metaAnalysis.vignette.Rmd
e9137ecbe852a8d7a14eab0413b392ef *doc/RCAS.metaAnalysis.vignette.html
03d0870863a622109453f2f188ef60b2 *doc/RCAS.vignette.R
eae14c71cd3106b4a2c54d86bee3ead6 *doc/RCAS.vignette.Rmd
2d0ec344209549f3be51d320c1b2326a *doc/RCAS.vignette.html
247e560902e4d56eb3cc2fe9bec32180 *doc/index.html
4f8573e5f8b697319117c88327a4a236 *extdata/EIF4A3Sauliere20121a.bed
2779ca3ab60fcb8e560e86978c5aa1d2 *extdata/EIF4A3Sauliere20121b.bed
32aa8a32aa4b0b1b69dd340437d6e924 *extdata/FMR1_Ascano2012a_hg19.bed
d4d7442832f9b1d40ed3bb589326839a *extdata/FMR1_Ascano2012b_hg19.bed
5ae985d0d00b8dbc5c4e51481d2799b4 *extdata/FUS_Nakaya2013c_hg19.bed
53ec61cdf36a09a61f64ca31fdf0a0ae *extdata/FUS_Nakaya2013d_hg19.bed
2af4c54bf647b7e46dec40972101443e *extdata/hg19.RCASDB.sqlite
f0de64b19c59a7b202c8faff4d599ace *extdata/hg19.sample.gtf
99fb8d5b4e2fc1a11b4e92d5bd994d05 *extdata/hg19.sample.gtf.granges.rds
aa87ec9a0e15f7849d72747634b911ce *extdata/msigdb_test.gmt
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile.bed
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile2.bed
5c2561dda8172f73b4b71fc28d36768c *help/AnIndex
8107167bfd57e1f2f8fe35f2c76c2dac *help/RCAS.rdb
eec3a2697e309a81192575c06e161875 *help/RCAS.rdx
c2832737b932f2a26fb2f0d9ba4617f8 *help/aliases.rds
f6cd6acd6c754b55c6dc1d1c3a37456c *help/paths.rds
acd4f6f9f78e03c939ffd92bf69b9b5d *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4dd01956b1f538f3dc19f30be5006280 *html/calculateCoverageProfile.html
5d9582ce6258c3b32fc254e3f65f6dd2 *html/calculateCoverageProfileFromTxdb.html
f603bebf675cb43933f5e3f515d3a4a3 *html/calculateCoverageProfileList.html
201908a2852f07d0e03846f88b2c5bbf *html/calculateCoverageProfileListFromTxdb.html
ecd8cbc1ec2af071fbff91e0ed0e4aa1 *html/createControlRegions.html
5299984f15cac057cfaa54688e6bb3b1 *html/createDB.html
c2f1d7953407b3d09950a9e6ab942801 *html/createOrthologousGeneSetList.html
f18ec2377f4f4708eb07a2d040244c4c *html/deleteSampleDataFromDB.html
73bebd971066786200938d07a98ccbde *html/discoverFeatureSpecificMotifs.html
2840173e03725c244e39461e1734f49f *html/extractSequences.html
d420fecc9e083c1b9fb7014a0d5a9285 *html/geneSets.html
fc3e8d3ae93bd39c97d48f7ca3ddd143 *html/getFeatureBoundaryCoverage.html
2d2bc9ac1012cf0162a95afa35a44b3e *html/getFeatureBoundaryCoverageBin.html
012eef1d83f69baa63bb6cf8c0d3d4f9 *html/getFeatureBoundaryCoverageMulti.html
1b8031510a8d4ce765c49039e8b4c0c6 *html/getIntervalOverlapMatrix.html
4136d6b0e1407623fcf3c2fcd1cb223e *html/getMotifSummaryTable.html
56f06ccdfea019823dbcf6943110aa5f *html/getTargetedGenesTable.html
28849d67e974ef6cabbecfe14178e83f *html/getTxdbFeatures.html
f062bbe698e0428c18174b54b7bb6f9c *html/getTxdbFeaturesFromGRanges.html
63fee17706f7bc13de0bc710195b6899 *html/gff.html
b94d347854de8322f5f44779c0f90337 *html/importBed.html
64306c82703f306baa674c8c32566368 *html/importBedFiles.html
172023178b44dd2547646ef3ec1ec97b *html/importGtf.html
44f6799b72b374245ed00e307dbddd45 *html/parseMsigdb.html
919e5ac0e1f56c45c69dde04ba3a1517 *html/plotFeatureBoundaryCoverage.html
911ce8949875855b32f0eda24b9ec572 *html/printMsigdbDataset.html
231c4d7108e9f62fd42a379159624e7b *html/queryGff.html
758df2fd7b6011b34772c82a0202339f *html/queryRegions.html
7f4d5c318a6a165442c42d322e0a16b9 *html/retrieveOrthologs.html
935670f0455fc89a7f9c1205683600a6 *html/runGSEA.html
88c153f1c27e4a85034853bb58ad5947 *html/runMotifRG.html
3dcd23a48f79093477cd91e782ff260c *html/runReport.html
ad0765ae199a2e399cd881483f396479 *html/runReportMetaAnalysis.html
05dc6cdf345b57ffaef860d760995637 *html/runTopGO.html
b7880b6ebcff5e15c58cbba84bae668c *html/summarizeDatabaseContent.html
17395ba67a7fa96d601a2a83fb8694d5 *html/summarizeQueryRegions.html
75519dfc2a22dc190b72bae7dd225f2e *html/summarizeQueryRegionsMulti.html
053cf68e09070e277a798b0736fb7874 *reporting_scripts/footer.html
b1442cb874099cb5af45301431024ee0 *reporting_scripts/header.html
1a4cc512e68285211bdc5bb351eb74ab *reporting_scripts/report.Rmd
e6ab695c29d907c81228c883e5af619c *reporting_scripts/reportMetaAnalysis.Rmd
