pstat_data {PathoStat} | R Documentation

## pathostat object generated from example pathoscope report files

### Description

This example data consists of 33 samples from a diet study with 11 subjects taking 3 different diets in random order

### Usage

    pstat

### Format

pathostat object extension of phyloseq-class experiment-level object:

otu_table

  OTU table with 41 taxa and 33 samples

sample_data

  Sample Data with 33 samples by 18 sample variables

tax_table

  Taxonomy Table with 41 taxa by 9 taxonomic ranks

sample_data

  Phylogenetic Tree with 41 tips and 40 internal nodes

### Value

pathostat object

[Package PathoStat version 1.6.1 Index]