findNewTSS {ORFik} | R Documentation

## Finds max peaks per trancsript from reads in the cagefile

### Description

Finds max peaks per trancsript from reads in the cagefile

### Usage

    findNewTSS(fiveUTRs, cageData, extension)

### Arguments

`fiveUTRs` | The 5' leader sequences as GRangesList
`cageData` | The location of the cage-file
`extension` | The number of basses upstream to add on transcripts

### Value

a Hits object

[Package ORFik version 1.0.0 Index]