subsetSwitchAnalyzeRlist {IsoformSwitchAnalyzeR} | R Documentation

## A function which subset all enteries in a switchAnalyzeRlist.

### Description

This function allows the user to remove data from all entereis in a switchAnalyzeRlist about isoforms that are no longer of interest.

### Usage

    subsetSwitchAnalyzeRlist(
        switchAnalyzeRlist,
        subset
    )

### Arguments

`switchAnalyzeRlist` | A `switchAnalyzeRlist` object.
`subset` | logical expression indicating which rows in the `isoformFeatures` entry should be keep. The rest of the switchAnalyzeRlist is then reduced to only contain the matching information.

### Value

A SwitchAnalyzeRlist only containing information about the isoforms (in their specific comparisons) indeicated with TRUE in the .

### Author(s)

Kristoffer Vitting-Seerup

### References

Vitting-Seerup et al. The Landscape of Isoform Switches in Human Cancers. Mol. Cancer Res. (2017).

### See Also

`createSwitchAnalyzeRlist`
`preFilter`

[Package IsoformSwitchAnalyzeR version 1.2.0 Index]