getCorrData.JointUniquePairs {IdMappingAnalysis} | R Documentation

## Create CorrData object from the JointUniquePairs object and two experiment sets

### Description

Creates CorrData object from JointUniquePairs object and two experiment sets optionally subsetting on a list of ID Maps from the UniquePairsMatch object

### Usage

    ## S3 method for class 'JointUniquePairs'
    getCorrData(this, expSet1, expSet2, groups=NULL, verbose=FALSE, ...)

### Arguments

`expSet1` | First ExperimentSet object with primary IDs corresponding (partially intersecting) with primaryIDs of the given JointUniquePairs object.
`expSet2` | Second ExperimentSet object with primary IDs corresponding (partially intersecting) with secondaryIDs of the given JointUniquePairs object.
`groups` | If not `NULL`, defines the subset from UniquePairsMatch on which the full event group to be formed. Default is `NULL`.
`verbose` | if `TRUE` enables diagnostic messages. Default is `FALSE`.
`...` | Not used

### Value

the CorrData object

### Author(s)

Alex Lisovich, Roger Day

### See Also

For more information see `JointUniquePairs`.

### Examples

     corrData<-examples$jointUniquePairs$getCorrData(
    			examples$msmsExperimentSet,examples$mrnaExperimentSet,
    			groups=c("NetAffx_Q", "DAVID_Q", "EnVision_Q"),verbose=TRUE);
     corrData$getSampleNames();

[Package IdMappingAnalysis version 1.24.0 Index]