drawDiffLogoTable {DiffLogo}R Documentation

Draws a table of DiffLogos

Description

Draws a table of DiffLogos.

Usage

drawDiffLogoTable(diffLogoTableObj, ...)

Arguments

diffLogoTableObj

the diffLogoTable-Object created by function prepareDiffLogoTable(...)

...

optional parameters for functon axis

Value

none (draws difference logo)

Examples

motif_folder= "extdata/pwm"
motif_names = c("HepG2","MCF7","HUVEC","ProgFib")
motifs = list()
for (name in motif_names) {
  fileName = paste(motif_folder,"/",name,".pwm",sep="")
  file = system.file(fileName, package = "DiffLogo")
  motifs[[name]] = getPwmFromPwmFile(file)
}

diffLogoTableObj = prepareDiffLogoTable(motifs)
drawDiffLogoTable(diffLogoTableObj)
[Package DiffLogo version 2.4.0 Index]