1cc00c4cda5e6d81e7b60de12ba7f841 *CITATION
028473561a5a5bb3c8e24856cffbdb88 *DESCRIPTION
40b332d4eb1688a0f94e73d97b7ec78a *INDEX
90a5a361e2ee669454212a33abfb94be *LICENCE
fbd812b8805bdaad5b6515d9a06e3a7d *Meta/Rd.rds
ba3cf3745330d6be1b195e0e5f626c6b *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
a3da6dae3a2df6b23b0cda1f6591697d *Meta/hsearch.rds
d448dad20014df26937f09bbea61248c *Meta/links.rds
1ebdf1ec47357c35c21ddda63bdc0038 *Meta/nsInfo.rds
f67cffd1a1bd9d6bd9fb104775e7dd83 *Meta/package.rds
e8355b069ac469f6372f3d675fed39d1 *Meta/vignette.rds
93404f1e03f601fc2c32d242d9e800d1 *NAMESPACE
400ef72a6b1ff1432f5fb8506ae864e4 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DChIPRep
f913156c1e45757a98f25397afad6e44 *R/DChIPRep.rdb
42bb57b9fb9e03d572276f55701c8e79 *R/DChIPRep.rdx
586f4325fd5f9d00bdc71b4d7f6fa1f3 *REFERENCES.bib
e64afa95a957ee4a1ae1f2de1d2deb16 *data/Rdata.rdb
7b93bc855a39405aeda4eae5ff6fe05d *data/Rdata.rds
4c57a0130bdd569212f8d747d4fb3c78 *data/Rdata.rdx
4adbc252e9da501efa24eb046611c147 *doc/DChIPRepVignette.R
24a72c306e605cbd39036bfae1fd10d8 *doc/DChIPRepVignette.Rmd
20912356118facf3d3f3e7617f82b39e *doc/DChIPRepVignette.html
2c62f2a90a4071b2cba63fcc82ed9876 *doc/index.html
fc6b649812959489432dea8b79ad7e22 *exec/DChIPRep.py
e4cbd1b84aec42dc495e9d358efe38f9 *extdata/BY_conf_K4me3_1__ORF_count.txt
a244a49d9e54aa8b33ea9c27b449efd1 *extdata/BY_conf_K4me3_2__ORF_count.txt
134e18cf2217983319a9c803ae32b5f5 *extdata/BY_conf_K4me3_3__ORF_count.txt
636d9760c80f3c27e35cd6ff2c502258 *extdata/BY_conf_WCE_1__ORF_count.txt
f80e4077caea40ea668467cc7e59b265 *extdata/BY_conf_WCE_2__ORF_count.txt
f96ab7e83afba76b18115f904419dd09 *extdata/BY_conf_WCE_3__ORF_count.txt
e0dc223dd119ca6e67266500c7999ffb *extdata/SET2_conf_K4me3_1__ORF_count.txt
ec40d79f0c6939b792189c9dfaf624af *extdata/SET2_conf_K4me3_2__ORF_count.txt
f6e1b7e21960f9fd9a6320b005722313 *extdata/SET2_conf_K4me3_3__ORF_count.txt
8a337a7280a1db1f92bad381b2044335 *extdata/SET2_conf_WCE_1__ORF_count.txt
9e6d5210fbb010db3774d1801a610d09 *extdata/SET2_conf_WCE_2__ORF_count.txt
cc1bb67c22e74d69d2a39a24b0df884a *extdata/SET2_conf_WCE_3__ORF_count.txt
652dfe5e622f513c20f360878f7a28a7 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam
f0467a9f4563a5157f6e0443ab746d26 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam.bai
b7823fd346f023e863fd023e6b87611f *help/AnIndex
85c294a23614246714e90f51fb65f097 *help/DChIPRep.rdb
03707e729feaef8927d2dcc5506e9d5e *help/DChIPRep.rdx
07c47344d887e5169eef3a0a1e0d74ff *help/aliases.rds
06f9fa3d7a472e1bc671a672bd59c51b *help/paths.rds
a2cb1b0439808ba4fed67848adbf1b9d *html/00Index.html
f0733a1040d5837286025a07117e87db *html/DChIPRep.html
1fe89c365202f20f7d4c98c9351cd091 *html/DChIPRepResults.html
254dc6ccce4f94a0d7065ef926fd1553 *html/DESeq2Data.html
109b250655438b2b84bb74c59142f73c *html/FDRresults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
eafadc6cb65288de28f41062b343d0f1 *html/TSS_galonska.html
e40ccd3e15064a82960a34fdccf2d3a7 *html/chip_galonska.html
553cbc77654d8562d20fff2864eda8d7 *html/exampleChipData.html
5900df34cbec58ef8a267860c8edef76 *html/exampleInputData.html
c838bbb0c19d0020d3bffa0991f27ece *html/exampleSampleTable.html
9d326e4e6bfc5e5e3a6db6246f915eb9 *html/getMATfromDataFrame.html
d4ce38b9a9d27f56239919c21671d38f *html/importData.html
401b320f8c4b238777b67a5bc276c069 *html/importDataFromMatrices.html
556718ce40b1bc69b46d2aeea5540289 *html/importData_soGGi.html
a4a449e23a80f417bec7cae521c83d6d *html/input_galonska.html
ebecb72bda16359a2311297b5028ea29 *html/plotProfiles.html
cd5558da27c4611cea43ee8831097e40 *html/plotSignificance.html
5c14d427b2ccc1c555dfae9117f949e8 *html/resultsDChIPRep.html
5f2963b25e23cefca4e0b19a954d807c *html/robust_mean.html
332d36392d7acca23aff95e6f85b4841 *html/runTesting.html
32118bebd9f2749e06dea495910acb9f *html/sample_table_galonska.html
da571b15dec9d8606cfcc9fd961a1a5b *html/show.html
3276bbfc469341f3e9e3e00248420f59 *html/summarizeCountsPerPosition.html
a1024840576ae3e09f3bb60243489831 *html/testData.html
