violinPlotD {DAPAR} | R Documentation

## Builds a violinplot from a dataframe

### Description

ViolinPlot for quantitative proteomics data

### Usage

    violinPlotD(qData, dataForXAxis = NULL, labels = NULL,
      group2Color = "Condition")

### Arguments

`qData` | A dataframe that contains quantitative data.
`dataForXAxis` | A vector containing the types of replicates to use as X-axis. Available values are: Label, Bio.Rep, Bio.Rep and Tech.Rep. Default is "Label".
`labels` | A vector of the conditions (labels) (one label per sample).
`group2Color` | A string that indicates how to color the replicates: one color per condition (value "Condition") or one color per replicate (value "Replicate"). Default value is by Condition.

### Value

A violinplot

### Author(s)

Florence Combes, Samuel Wieczorek

### See Also

`densityPlotD`

### Examples

    require(DAPARdata)
    data(Exp1_R25_pept)
    library(vioplot)
    qData <- Biobase::exprs(Exp1_R25_pept)
    types <- c("Label","Bio.Rep")
    dataForXAxis <- Biobase::pData(Exp1_R25_pept)[,types]
    labels <- Biobase::pData(Exp1_R25_pept)[,"Label"]
    violinPlotD(qData, dataForXAxis, labels)

[Package DAPAR version 1.12.11 Index]