R: StatusHeatmap

StatusHeatmap {CNVPanelizer}

R Documentation

StatusHeatmap

Description

Generates a status heapmap for all samples analyzed

Usage

            StatusHeatmap(dfData,
                          statusColors = c("Deletion" = "blue",
                                           "Normal" = "green",
                                           "Amplification" = "red"),
                          header = "Status Heatmap",
                          filepath = "CNVPanelizerHeatMap.png")

Arguments

`dfData`	data frame with the "Amplification", "Deletion" and "Normal" status
`statusColors`	A named vector with the colors associated with each level
`header`	Header text at the plot
`filepath`	Filepath where the generated heatmap is saved

Value

Returns the filepath of the saved Heatmap

Author(s)

Cristiano Oliveira

Examples

    
    
            StatusHeatmap(dfData,
                          statusColors = c("Deletion" = "blue",
                                           "Normal" = "green",
                                           "Amplification" = "red"),
                          header = "Status Heatmap",
                          filepath = "CNVPanelizerHeatMap.png")

[Package CNVPanelizer version 1.12.0 Index]