Package: MSnbase
Title: Base Functions and Classes for Mass Spectrometry and Proteomics
Version: 2.6.4
Description: MSnbase provides infrastructure for manipulation,
	     processing and visualisation of mass spectrometry and
	     proteomics data, ranging from raw to quantitative and
	     annotated data.
Authors@R: c(person(given = "Laurent", family = "Gatto",
		    email = "lg390@cam.ac.uk",
		    role = c("aut","cre")),
	     person(given = "Guangchuang", family = "Yu",
		    email = "guangchuangyu@gmail.com",
		    role = "ctb"),
	     person(given = "Samuel", family = "Wieczorek",
		    email = "samuel.wieczorek@cea.fr",
		    role = "ctb"),
	     person(given = "Vasile-Cosmin", family = "Lazar",
		    email = "v.cosmin.lazar@googlemail.com",
		    role = "ctb"),
	     person(given = "Vladislav", family = "Petyuk",
		    email = "petyuk@gmail.com",
		    role = "ctb"),
	     person(given = "Thomas", family = "Naake",
		    email = "tn299@cam.ac.uk",
		    role = "ctb"),
	     person(given = "Richie", family = "Cotton",
		    email = "richierocks@gmail.com",
		    role = "ctb"),
	     person(given = "Arne", family = "Smits",
		    email = "arne.smits@embl.de",
		    role = "ctb"),
	     person(given = "Martina", family = "Fischer",
		    email = "FischerM@rki.de",
		    role = "ctb"),
	     person(given = "Adriaan", family = "Sticker",
		    email = "adriaan.sticker@ugent.be",
		    role = "ctb"),
	     person(given = "Ludger", family = "Goeminne",
		    email = " ludger.goeminne@vib-ugent.be",
		    role = "ctb"),
	     person(given = "Lieven", family = "Clement",
		    email = " Lieven.Clement@ugent.be",
		    role = "ctb"),
	     person(given = "Sigurdur", family = "Smarason",
		    email = " Sigurdur.Smarason@eurac.edu",
		    role = "ctb"),
	     person(given = "Johannes", family = "Rainer",
		    email = "Johannes.Rainer@eurac.edu",
		    role = c("aut", "cre")),
	     person(given = "Sebastian", family = "Gibb",
		    email = "mail@sebastiangibb.de",
		    role = c("aut", "cre")))
Author: Laurent Gatto, Johannes Rainer and Sebastian Gibb with
    contributions from Guangchuang Yu, Samuel Wieczorek, Vasile-Cosmin
    Lazar, Vladislav Petyuk, Thomas Naake, Richie Cotton, Arne Smits,
    Martina Fisher, Ludger Goeminne, Adriaan Sticker and Lieven
    Clement.
Maintainer: Laurent Gatto <lg390@cam.ac.uk>
Depends: R (>= 3.1), methods, BiocGenerics (>= 0.7.1), Biobase (>=
        2.15.2), mzR (>= 2.13.6), BiocParallel, ProtGenerics (>= 1.9.1)
Imports: IRanges (>= 2.13.28), plyr, preprocessCore, vsn, grid, stats4,
        affy, impute, pcaMethods, MALDIquant (>= 1.16), mzID (>=
        1.5.2), digest, lattice, ggplot2, S4Vectors, XML, scales, MASS,
        Rcpp
Suggests: testthat, pryr, gridExtra, microbenchmark, zoo, knitr (>=
        1.1.0), rols, Rdisop, pRoloc, pRolocdata (>= 1.7.1), msdata (>=
        0.19.3), roxygen2, rgl, rpx, AnnotationHub, BiocStyle (>=
        2.5.19), rmarkdown, imputeLCMD, norm, gplots, shiny, magrittr,
        SummarizedExperiment
LinkingTo: Rcpp
License: Artistic-2.0
LazyData: yes
VignetteBuilder: knitr
BugReports: https://github.com/lgatto/MSnbase/issues
URL: https://github.com/lgatto/MSnbase
biocViews: Infrastructure, Proteomics, MassSpectrometry,
        QualityControl, DataImport
RoxygenNote: 6.0.1
git_url: https://git.bioconductor.org/packages/MSnbase
git_branch: RELEASE_3_7
git_last_commit: 4683686
git_last_commit_date: 2018-09-21
Date/Publication: 2018-09-21
NeedsCompilation: yes
Packaged: 2018-09-22 01:33:46 UTC; biocbuild
Built: R 3.5.1; x86_64-apple-darwin15.6.0; 2018-09-22 10:19:40 UTC; unix
