Class "motifSig"

Description

An object of class "motifSig" represents the output of function motifSignature

Objects from the Class

Objects can be created by calls of the form new("motifSig", signature, freq, nodelist, gpcol).

Slots

signatures

list object of class "pfm"

freq

code"numeric" signature frequency

nodelist

list object of class "ouNode"

gpcol

code"character" signature group color sets

Methods

signatures

signature(object = "motifSig") return the signatures of motifSig

frequence

signature(object = "motifSig") return the frequency of motifSig

nodelist

signature(object = "motifSig") return the nodelist of motifSig

sigColor

signature(object = "motifSig") return the group color sets of motifSig