estimateLogicle.GatingHierarchy {flowWorkspace}R Documentation

Compute logicle transformation from the flowData associated with a GatingHierarchy

Description

See details in estimateLogicle

Usage

## S3 method for class 'GatingHierarchy'
estimateLogicle(x, channels, ...)

Arguments

x

a GatingHierarchy

channels

channels or markers for which the logicle transformation is to be estimated.

...

other arguments

Value

transformerList object

Examples

## Not run: 
 # gs is a GatingSet
 trans.list <- estimateLogicle(gs[[1]], c("CD3", "CD4", "CD8")) 
 # trans.list is a transformerList that can be directly applied to GatinigSet
 gs <- transform(gs, trans.list)

## End(Not run)
[Package flowWorkspace version 3.26.9 Index]