73d691799295fce660caa2cf3259b003 *DESCRIPTION
a59a213d1e3e164edeb7ed0a4a93b5ae *INDEX
33345742374b952bc9db0be16248cd55 *Meta/Rd.rds
4cdd9060d0fe33bbd51f54fe8880be62 *Meta/data.rds
a46f1debdc1f45796be2b2a0e6b3b378 *Meta/features.rds
21bda3264e0dfe77fb050428f213ffa7 *Meta/hsearch.rds
aae86c14726f49697ffc7df88bf9c839 *Meta/links.rds
ce6f46e1f6a6d6014101186521777ece *Meta/nsInfo.rds
c2fba499c468c439be4c84ca9e6c7364 *Meta/package.rds
9964ae19c252b1e44673dbeb0e83bbd7 *Meta/vignette.rds
fede08ec40603721c9f0de1a7e66ee0f *NAMESPACE
f1c50f69fa224b3b1bab9ac1edcac26a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/TPP
03745099c0cb07af41f47d6d8b8ea942 *R/TPP.rdb
92a685338671a0a7e06d9707fa44bdd0 *R/TPP.rdx
8f9f2358409273ebc5c5d4ac78edbcc8 *data/TPPTR_reference_results_HepG2.RData
ae998c0fe9447fbe1ff3b833a9506bba *data/datalist
3b2e7f58a451bafc144053e0cf4a7083 *data/hdacCCR_smallExample.RData
f8b1baab71c2edb5c204a0d2da38f7d5 *data/hdacTR_resultsTable_smallExample.RData
b3013f12ee19b16668f58c7d5f875928 *data/hdacTR_smallExample.RData
dc278f421f5ae48596b6f289e32a2901 *data/panobinostat_2DTPP_smallExample.RData
6ad514f959c76922d0c672a349b781a8 *doc/NPARC_analysis_of_TPP_TR_data.R
fa7fd85774a25029ae2290acaaf106f3 *doc/NPARC_analysis_of_TPP_TR_data.Rnw
9401232d27830780f6e44b637f17b870 *doc/NPARC_analysis_of_TPP_TR_data.pdf
aa75a17b21c8ede50f9353d1d432a833 *doc/TPP_introduction_1D.R
e4846982117476d7ca3448d93d868503 *doc/TPP_introduction_1D.Rnw
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4425e691b58657f82c85f81c93ab2850 *doc/TPP_introduction_2D.R
7159128bc1ff98a46830c6e4d47bdfd1 *doc/TPP_introduction_2D.Rnw
80180b1eb54255834883f2262e5fa972 *doc/TPP_introduction_2D.pdf
3f4d5be39f160cc692fb594ac071478c *doc/index.html
47d6dcf6728d567fa8dff94846cf7146 *example_data/2D_example_data/PFC_39093_PF1_QV1_P0101918C.txt
49936bd44f6f198204a1a969082d9a56 *example_data/2D_example_data/PFC_39099_PF1_QV1_P0101908C.txt
36404d1fb410c4c8fd29d7cd73180527 *example_data/2D_example_data/PFC_39101_PF1_QV1_P0101898C.txt
bd6aa3e7c9e0e1b15883f40e4ac9ca2b *example_data/2D_example_data/PFC_39106_PF1_QV1_P0101868C.txt
72a3931b1e3fe02ba254fb369357e571 *example_data/2D_example_data/PFC_39108_PF1_QV1_P0101878C.txt
b18d4d236187e0d929cc837585bcca94 *example_data/2D_example_data/PFC_39110_PF1_QV1_P0101888C.txt
69ae5a1fbc257b00456c2d9dbd5d6768 *example_data/2D_example_data/Panobinostat_TPP-2D_config.xlsx
c4df4f396442f81fd1987e0ab9a85fc7 *example_data/2D_example_data/fractAbundInData.RData
b9f231613961d258afe24bcc7472c54b *example_data/2D_example_data/referenceNormData.RData
7ac1093552eaf281576d5f20e605e5d6 *example_data/2D_example_data/shortCCRresults.RData
bdaf865b9856729c2084de6081e72521 *example_data/2D_example_data/shortData2d.RData
f4d14590fe21a76f30fa18c3e5889ee7 *example_data/CCR_example_data/Panobinostat_TPP-CCR_config.xlsx
5e0f32079fbfa4b4e7ffcb5aec39c4e4 *example_data/CCR_example_data/panobinostat_1_merged_results_20150227_1017_proteins.txt
d41ccfe4fb92d18ac9daeecc1db7bf19 *example_data/CCR_example_data/panobinostat_2_merged_results_20150227_1110_proteins.txt
9354d118e09492f93f7b8bc8d1ca861d *example_data/TR_example_data/Panobinostat_TPP-TR_config.xlsx
0c67cbada22f6f71a009961f3e5b4358 *example_data/TR_example_data/panobinostat_1_merged_results_20150226_1013_proteins.txt
16b1e70d2e5c17c3bd55f0c9604a0683 *example_data/TR_example_data/panobinostat_2_merged_results_20150226_1139_proteins.txt
b829591e84c8a081a4d4ccb6b6862b7a *example_data/TR_example_data/vehicle_1_merged_results_20150227_0908_proteins.txt
fb36f922b446d48f649597a371ebdd62 *example_data/TR_example_data/vehicle_2_merged_results_20150227_0847_proteins.txt
1256b0a8d12397ba0a6e1ba06829eef6 *extdata/randomESet.Rdata
e5dfe3c3cf805dab702697c1d69a5acf *extdata/validationData_meltCurveFilter.Rdata
ac65d119549f18e6a29ef490492f7833 *extdata/validationData_pvalBinning.Rdata
5780f9c0ddd0e6bd267e6d7bc4a02c34 *extdata/validationData_pvalComputation.Rdata
cd73bfaf387450d7a0a635936d19c438 *help/AnIndex
1f7678429464fa67ee50ab08fb38e082 *help/TPP.rdb
cda12ef6c27bae0008180793e1d1d685 *help/TPP.rdx
6467beb74a7d4349ded5cc019f02c0a1 *help/aliases.rds
7d58b3af69a551140aeb7b6b870bf2e3 *help/paths.rds
b206348b32a1e6093ded81834be66808 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
34cf6463786c086fbdc26258775f4226 *test_data/Panobinostat_2DTPP_smallExample.R
dc278f421f5ae48596b6f289e32a2901 *test_data/panobinostat_2DTPP_smallExample.RData
32427e8533075fe7a32b238cbe30c6a6 *test_data/panobinostat_2D_fcResults.rds
21d5b630e163b043c02b60c3f5d2ad15 *test_data/panobinostat_2D_fcResults2.rds
b3d7fd094076872739b8d107d295fdc7 *test_data/panobinostat_2D_fitResults.rds
bbcb9c667cff575d2fe212aeca32809e *test_data/panobinostat_2D_fitResults2.rds
5c5e358c5fb3558f39dd004465c0f744 *test_data/panobinostat_2D_fitResults3.rds
020b7cb8b6fcdd5d66709139d2f962e4 *test_data/panobinostat_2D_importResults.rds
9e1a158df9cc2f917c293587c7369acc *test_data/panobinostat_2D_importResults2.rds
c9549a07a02d3bb7c7948ebb9a87ee64 *test_data/panobinostat_2D_normResults.rds
f43fe33c95beca4e8dd409cc38c60a02 *test_data/panobinostat_2D_normResults2.rds
3a4bc9d77bd53291f50b26d9e68df87a *test_data/panobinostat_2D_normResults3.rds
c9c7d328ba3df010cd076da9ecdb4419 *test_data/panobinostat_CCR_fitResults.rds
04b312febb661cf7e9f3ba6f022f618f *test_data/panobinostat_ex_confg.txt
77926387b04492a51eebe58ce3ae78f2 *test_data/panobinostat_ex_confg2.txt
a131fcceb128328668c30dd31027c05d *tpp2d_report.Rmd
