Survival analysis using transcriptional networks inferred by the RTN package

Documentation for package ‘RTNsurvival’ version 1.2.0

RTNsurvival-package	Performs survival analysis using transcriptional networks inferred by the RTN package.
dualCoxTable	Cox regression analysis for dual regulons
dualSurvivalPanel	Panel plot of regulons in a inferred dual
dualSurvivalPanel-method	Panel plot of regulons in a inferred dual
RTNsurvival	Performs survival analysis using transcriptional networks inferred by the RTN package.
survival.data	A pre-processed dataset for demonstration purposes only.
TNS	TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package.
TNS-class	TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package.
tnsCox	Cox regression analysis for TNS class objects.
tnsCox-method	Cox regression analysis for TNS class objects.
tnsGet	Get information from slots in a TNS object
tnsGet-method	Get information from slots in a TNS object
tnsGSEA2	2-tailed Gene Set Enrichment Analysis on Transcriptional Networks.
tnsGSEA2-method	2-tailed Gene Set Enrichment Analysis on Transcriptional Networks.
tnsKM	Kaplan-Meier analysis for TNS class objects.
tnsKM-method	Kaplan-Meier analysis for TNS class objects.
tnsPlotGSEA2	Plot 2-tailed GSEA for a sample from a TNS
tnsPreprocess	Preprocessing of TNS class objects.
tnsPreprocess-method	Preprocessing of TNS class objects.