Murine Palate miRNA Expression Analysis

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Documentation for package ‘MmPalateMiRNA’ version 1.28.0

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MmPalateMiRNA-package R package compendium for the analysis of murine palate two-color miRNA expression data
checkMVs Check an 'RGList' object for missing values
checkMVs-method Check an 'RGList' object for missing values
checkMVs-methods Check an 'RGList' object for missing values
checkOutliers Check 'RGList' object for outlying values
checkOutliers-method Check 'RGList' object for outlying values
checkOutliers-methods Check 'RGList' object for outlying values
clustPlot Plot expression profiles
densityplot Density plots of log2 intensity values
densityplot-method Density plots of log2 intensity values
densityplot-methods Density plots of log2 intensity values
filterArray Filter an 'RGList' object to remove probes
filterArray-method Filter an 'RGList' object to remove probes
filterArray-methods Filter an 'RGList' object to remove probes
fixMVs 'Fix' an 'RGList' object with missing values.
fixOutliers 'Fix' an 'RGList' object with outlying values.
imputeKNN Impute missing values
levelplot Pairwise distance between arrays
levelplot-method Pairwise distance between arrays
levelplot-methods Pairwise distance between arrays
MADvsMedianPlot Spread vs location of probe intensities
MADvsMedianPlot-method Spread vs location of probe intensities
MADvsMedianPlot-methods Spread vs location of probe intensities
MAplot MA plot
MAplot-method MA plot
MAplot-methods MA plot
MmPalateMiRNA R package compendium for the analysis of murine palate two-color miRNA expression data
PalateData Murine Secondary Palate Development miRNA Expression Data