as.DGEList {DEFormats}R Documentation

Convert to DGEList

Description

Coerces an object to DGEList.

Usage

as.DGEList(x, ...)

## S3 method for class 'DESeqDataSet'
as.DGEList(x, ...)

Arguments

x

an R object

...

additional arguments to be passed to methods

Value

A DGEList object.

Methods (by class)

Author(s)

Andrzej Oleś <andrzej.oles@embl.de>, 2016-2017

See Also

as.DESeqDataSet

Examples

require("DESeq2")

se = simulateRnaSeqData(output = "RangedSummarizedExperiment")
se

dds = DESeqDataSet(se, design = ~ condition)   
dds

as.DGEList(dds)
[Package DEFormats version 1.6.1 Index]