R: Bar plot of missing values per lines and per condition

mvPerLinesHistoPerCondition_HC {DAPAR}

R Documentation

Bar plot of missing values per lines and per condition

Description

This method plots a bar plot which represents the distribution of the number of missing values (NA) per lines (ie proteins) and per conditions. Same as the function mvPerLinesHistoPerCondition but uses the package highcharter.

Usage

mvPerLinesHistoPerCondition_HC(qData, samplesData, indLegend = "auto",
  showValues = FALSE)

Arguments

`qData`	A dataframe that contains quantitative data.
`samplesData`	A dataframe where lines correspond to samples and columns to the meta-data for those samples.
`indLegend`	The indice of the column name's in `pData()` tab
`showValues`	A logical that indicates wether numeric values should be drawn above the bars.

Value

A bar plot

Author(s)

Samuel Wieczorek

Examples

require(DAPARdata)
data(Exp1_R25_pept)
qData <- Biobase::exprs(Exp1_R25_pept)
samplesData <- Biobase::pData(Exp1_R25_pept)
mvPerLinesHistoPerCondition_HC(qData, samplesData)

[Package DAPAR version 1.10.4 Index]