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| applyCutoffs | Single-cell debarcoding (2) |
| applyCutoffs-method | Single-cell debarcoding (2) |
| assignPrelim | Single-cell debarcoding (1) |
| assignPrelim-method | Single-cell debarcoding (1) |
| bc_ids | Extraction and replacement methods for objects of class 'dbFrame' |
| bc_ids-method | Extraction and replacement methods for objects of class 'dbFrame' |
| bc_key | Extraction and replacement methods for objects of class 'dbFrame' |
| bc_key-method | Extraction and replacement methods for objects of class 'dbFrame' |
| compCytof | Compensate CyTOF experiment |
| compCytof-method | Compensate CyTOF experiment |
| computeSpillmat | Compute spillover matrix |
| computeSpillmat-method | Compute spillover matrix |
| concatFCS | FCS file concatination |
| concatFCS-method | FCS file concatination |
| counts | Extraction and replacement methods for objects of class 'dbFrame' |
| counts-method | Extraction and replacement methods for objects of class 'dbFrame' |
| data | Example data sets |
| dbFrame | Debarcoding frame class |
| dbFrame-class | Debarcoding frame class |
| dbFrame-methods | Extraction and replacement methods for objects of class 'dbFrame' |
| deltas | Extraction and replacement methods for objects of class 'dbFrame' |
| deltas-method | Extraction and replacement methods for objects of class 'dbFrame' |
| estCutoffs | Estimation of distance separation cutoffs |
| estCutoffs-method | Estimation of distance separation cutoffs |
| estTrim | Estimation of optimal trim value |
| estTrim-method | Estimation of optimal trim value |
| exprs | Extraction and replacement methods for objects of class 'dbFrame' |
| exprs-method | Extraction and replacement methods for objects of class 'dbFrame' |
| isotope_list | Example data sets |
| mhl_cutoff | Extraction and replacement methods for objects of class 'dbFrame' |
| mhl_cutoff-method | Extraction and replacement methods for objects of class 'dbFrame' |
| mhl_cutoff<- | Extraction and replacement methods for objects of class 'dbFrame' |
| mhl_cutoff<--method | Extraction and replacement methods for objects of class 'dbFrame' |
| mhl_dists | Extraction and replacement methods for objects of class 'dbFrame' |
| mhl_dists-method | Extraction and replacement methods for objects of class 'dbFrame' |
| mp_cells | Example data sets |
| normCytof | Bead-based normalization |
| normCytof-method | Bead-based normalization |
| normed_bcs | Extraction and replacement methods for objects of class 'dbFrame' |
| normed_bcs-method | Extraction and replacement methods for objects of class 'dbFrame' |
| outFCS | Write population-wise FCS files |
| outFCS-method | Write population-wise FCS files |
| outFrames | Population-wise 'flowFrame's from a 'dbFrame' |
| outFrames-method | Population-wise 'flowFrame's from a 'dbFrame' |
| plotEvents | Event plot |
| plotEvents-method | Event plot |
| plotMahal | Biaxial plot |
| plotMahal-method | Biaxial plot |
| plotSpillmat | Spillover matrix heat map |
| plotYields | Yield plot |
| plotYields-method | Yield plot |
| raw_data | Example data sets |
| sample_ff | Example data sets |
| sample_key | Example data sets |
| sep_cutoffs | Extraction and replacement methods for objects of class 'dbFrame' |
| sep_cutoffs-method | Extraction and replacement methods for objects of class 'dbFrame' |
| sep_cutoffs<- | Extraction and replacement methods for objects of class 'dbFrame' |
| sep_cutoffs<--method | Extraction and replacement methods for objects of class 'dbFrame' |
| ss_exp | Example data sets |
| yields | Extraction and replacement methods for objects of class 'dbFrame' |
| yields-method | Extraction and replacement methods for objects of class 'dbFrame' |