Package: philr
Type: Package
Title: Phylogenetic partitioning based ILR transform for metagenomics
        data
Version: 1.2.0
Date: 2017-04-07
Authors@R: c(person("Justin", "Silverman", role=c("aut", "cre"),
                     email = "jsilve24@gmail.com"))
Author: Justin Silverman
Maintainer: Justin Silverman <jsilve24@gmail.com>
Description: PhILR is short for Phylogenetic Isometric Log-Ratio Transform.
 This package provides functions for the analysis of compositional
 data (e.g., data representing proportions of different variables/parts).
 Specifically this package allows analysis of compositional data where the parts
 can be related through a phylogenetic tree  (as is common in microbiota survey
 data) and makes available the Isometric Log Ratio transform built from the
 phylogenetic tree and utilizing a weighted reference measure.
License: GPL-3
LazyData: TRUE
RoxygenNote: 6.0.1
Imports: ape, phangorn, tidyr, ggplot2, ggtree
Depends:
Suggests: testthat, knitr, rmarkdown, BiocStyle, phyloseq, glmnet,
        dplyr
VignetteBuilder: knitr
biocViews: Sequencing, Microbiome, Metagenomics, Software
URL: https://github.com/jsilve24/philr
BugReports: https://github.com/jsilve24/philr/issues
NeedsCompilation: no
Packaged: 2017-04-25 01:36:14 UTC; biocbuild
Built: R 3.4.0; ; 2017-04-25 06:14:28 UTC; windows
