Package: doppelgangR
Maintainer: Levi Waldron <lwaldron.research@gmail.com>
Depends: R (>= 3.3), Biobase, BiocParallel
Suggests: BiocStyle, knitr, rmarkdown, curatedOvarianData, ROCR, pROC,
        RUnit, simulatorZ, proxy
Imports: sva, impute, digest, mnormt, methods, grDevices, graphics,
        stats, utils
Author: Levi Waldron, Markus Riester, Marcel Ramos
Version: 1.4.1
Date: 2017-05-07
License: GPL (>=2.0)
Title: Identify likely duplicate samples from genomic or meta-data
Description: The main function is doppelgangR(), which takes as minimal
        input a list of ExpressionSet object, and searches all list
        pairs for duplicated samples.  The search is based on the
        genomic data (exprs(eset)), phenotype/clinical data
        (pData(eset)), and "smoking guns" - supposedly unique
        identifiers found in pData(eset).
URL: https://github.com/lwaldron/doppelgangR
BugReports: https://github.com/lwaldron/doppelgangR/issues
VignetteBuilder: knitr
biocViews: RNASeq, Microarray, GeneExpression, QualityControl
NeedsCompilation: no
Packaged: 2017-05-09 00:52:12 UTC; biocbuild
Built: R 3.4.0; ; 2017-05-09 03:07:07 UTC; windows
