NAME	DESCRIPTION	LINK
Affymetrix CEL	Affymetrix CEL file.	http://media.affymetrix.com/support/developer/powertools/changelog/gcos-agcc/cel.html
Affymetrix format	Affymetrix genotyping format.	http://www.affymetrix.com/support/technical/whitepapers.affx
Affymetrix other	Other Affymetrix file formats (DAT, RPT, and TXT formats).	http://www.affymetrix.com/support/technical/whitepapers.affx
BAM	Binary representation of SAM (Sequence Alignment/Map).	http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2723002/
Converted FCS file	FCS file converted for FLOW analysis.	https://en.wikipedia.org/wiki/Flow_Cytometry_Standard; http://bioconductor.org/packages/release/bioc/html/flowCore.html
Custom	A user defined custom format.	http://immport.org/immport-open/public/home/documentation
CyTOF result in fcs format	CyTOF result in FCS format.	https://en.wikipedia.org/wiki/Flow_Cytometry_Standard; http://bioconductor.org/packages/release/bioc/html/flowCore.html
CyTOF workspace	CyTOF analysis software workspace.	http://immport.org/immport-open/public/home/documentation
FASTQ	FASTQ- sequencing read data file format for combining the sequence and per base quality score.	http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2847217/
FPKM	Fragments Per Kilobase Of Exon Per Million Fragments- Measurement of mRNA abundance using RNA-seq data.	http://www.ncbi.nlm.nih.gov/pubmed/20436464
Flow cytometry result in fcs format	Flow cytometer or analysis software output in FCS format.	https://en.wikipedia.org/wiki/Flow_Cytometry_Standard; http://bioconductor.org/packages/release/bioc/html/flowCore.html
Flow cytometry result in text format	Flow cytometer or analysis software output in text format.	https://en.wikipedia.org/wiki/Flow_Cytometry_Standard; http://bioconductor.org/packages/release/bioc/html/flowCore.html
Flow cytometry workspace	Flow cytometry analysis software workspace.	http://docs.flowjo.com/vx/workspaces-and-samples/ws-savinganalysis/
GenePattern data set	GenePattern GCT file format.	http://www.broadinstitute.org/cancer/software/genepattern/file-formats-guide
HLA result	HLA result in ImmPort format.	http://immport.org/immport-open/public/home/documentation
Hemagglutination inhibition result	HIA result in custom format.	http://immport.org/immport-open/public/home/documentation
Illumina BeadArray	Illumina BeadArray format.	http://www.illumina.com/content/illumina-marketing/amr/en_US/technology/beadarray-technology.html
Illumina GA	Illumina Genome Analyzer sequencer non-normalized result.	https://support.illumina.com/sequencing/sequencing_instruments/genome_analyzer_iix.html
ImmPort template	ImmPort defined file format.	http://immport.org/immport-open/public/home/documentation
KIR result	KIR result.	http://immport.org/immport-open/public/home/documentation
MBAA result	Multiplex Bead Array Assay. bead level result are the primary output of MBBA instruments.	http://immport.org/immport-open/public/home/documentation
MBAA	Multiplex Bead Array Assay.	http://immport.org/immport-open/public/home/documentation
Markers or channels description	Description of marker or channels in a FCS file.	http://immport.org/immport-open/public/home/documentation
Mass spectrometry result	Mass result in custom format.	http://immport.org/immport-open/public/home/documentation
Q-PCR result	Q-PCR result file.	http://immport.org/immport-open/public/home/documentation
RPKM	Reads Per Kilobase per Million reads- Measurement of mRNA abundance using RNA-seq data.	http://www.ncbi.nlm.nih.gov/pubmed/18516045
TPM	Transcripts per million reads- Measurement of mRNA abundance using RNA-seq data.	http://www.ncbi.nlm.nih.gov/pubmed/22872506
Archived	Files stored and not linked to result data.	http://immport.org/immport-open/public/home/documentation
CRF Description	Assessment CRF document.	https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C40988&ns=NCI_Thesaurus
Flow cytometry compensation or control	Flow cytometry compensation or control files.	http://immport.org/immport-open/public/home/documentation;http://flowbook.denovosoftware.com/Flow_Book/Chapter_5%3A_Immunofluorescence_and_Colour_Compensation
ImmPort BDC file	ImmPort defined file format for database updates.	http://immport.org/immport-open/public/home/documentation
Neutralizing antibody titer result	Neutralizing antibody titer result	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C94196&ns=NCI_Thesaurus
Image Histology result	Image Histology result	http://immport.org/immport-open/public/home/documentation
Custom assay result	Custom assay result.	http://immport.org/immport-open/public/home/documentation
CyTOF result	CyTOF result.	http://immport.org/immport-open/public/home/documentation; https://en.wikipedia.org/wiki/Mass_cytometry
ELISA result	Measurement values from ELISA assays.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C16553&ns=NCI_Thesaurus
ELISPOT result	Measurement values from ELISpot assays.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C102632&ns=NCI_Thesaurus
Flow cytometry result	Flow cytometry result.	http://immport.org/immport-open/public/home/documentation;http://flowbook.denovosoftware.com/Flow_Book/Chapter_5%3A_Immunofluorescence_and_Colour_Compensation
Gene expression result	Measurement values from  Gene expression assays.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C16608&ns=NCI_Thesaurus
Genotyping result	Measurement Genotyping result.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C45447&ns=NCI_Thesaurus
HAI description	Metadata for HAI results.	http://immport.org/immport-open/public/home/documentation
HAI result	HAI result.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C120688&ns=NCI_Thesaurus
RNA sequencing result	Measurement RNA sequencing result.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurusnull=C45447=NCI_Thesaurus
Virus neutralization result	Virus neutralization results.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C94196&ns=NCI_Thesaurus
Virus titer result	Measurement of virus titer.	http://immport.org/immport-open/public/home/documentation; https://nciterms.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C67454&ns=NCI_Thesaurus
