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| AccnumFilter | Filtering src_organism objects |
| AliasFilter | Filtering src_organism objects |
| BasicFilter-class | Filtering src_organism objects |
| cds-method | Extract genomic features from src_organism objects |
| cdsBy-method | Extract genomic features from src_organism objects |
| cdsBy_tbl | Extract genomic features from src_organism objects |
| CdsChromFilter | Filtering src_organism objects |
| CdsEndFilter | Filtering src_organism objects |
| CdsIdFilter | Filtering src_organism objects |
| CdsNameFilter | Filtering src_organism objects |
| CdsStartFilter | Filtering src_organism objects |
| CdsStrandFilter | Filtering src_organism objects |
| cds_tbl | Extract genomic features from src_organism objects |
| columns-method | Using the "select" interface on src_organism objects |
| EnsemblFilter | Filtering src_organism objects |
| EnsemblprotFilter | Filtering src_organism objects |
| EnsembltransFilter | Filtering src_organism objects |
| EntrezFilter | Filtering src_organism objects |
| EnzymeFilter | Filtering src_organism objects |
| EvidenceallFilter | Filtering src_organism objects |
| EvidenceFilter | Filtering src_organism objects |
| ExonChromFilter | Filtering src_organism objects |
| ExonEndFilter | Filtering src_organism objects |
| ExonIdFilter | Filtering src_organism objects |
| ExonNameFilter | Filtering src_organism objects |
| ExonRankFilter | Filtering src_organism objects |
| exons-method | Extract genomic features from src_organism objects |
| exonsBy-method | Extract genomic features from src_organism objects |
| exonsBy_tbl | Extract genomic features from src_organism objects |
| ExonStartFilter | Filtering src_organism objects |
| ExonStrandFilter | Filtering src_organism objects |
| exons_tbl | Extract genomic features from src_organism objects |
| fiveUTRsByTranscript-method | Extract genomic features from src_organism objects |
| fiveUTRsByTranscript_tbl | Extract genomic features from src_organism objects |
| FlybaseCgFilter | Filtering src_organism objects |
| FlybaseFilter | Filtering src_organism objects |
| FlybaseProtFilter | Filtering src_organism objects |
| GeneChromFilter | Filtering src_organism objects |
| GeneEndFilter | Filtering src_organism objects |
| GenenameFilter | Filtering src_organism objects |
| genes-method | Extract genomic features from src_organism objects |
| GeneStartFilter | Filtering src_organism objects |
| GeneStrandFilter | Filtering src_organism objects |
| genes_tbl | Extract genomic features from src_organism objects |
| GoallFilter | Filtering src_organism objects |
| GoFilter | Filtering src_organism objects |
| GRangesFilter | Filtering src_organism objects |
| GRangesFilter-class | Filtering src_organism objects |
| hg38light | Utilities used in examples, vignettes, and tests |
| intronsByTranscript-method | Extract genomic features from src_organism objects |
| intronsByTranscript_tbl | Extract genomic features from src_organism objects |
| IpiFilter | Filtering src_organism objects |
| keys-method | Using the "select" interface on src_organism objects |
| keytypes-method | Using the "select" interface on src_organism objects |
| MapFilter | Filtering src_organism objects |
| mapIds-method | Using the "select" interface on src_organism objects |
| MgiFilter | Filtering src_organism objects |
| mm10light | Utilities used in examples, vignettes, and tests |
| OmimFilter | Filtering src_organism objects |
| OntologyallFilter | Filtering src_organism objects |
| OntologyFilter | Filtering src_organism objects |
| PfamFilter | Filtering src_organism objects |
| PmidFilter | Filtering src_organism objects |
| promoters-method | Extract genomic features from src_organism objects |
| promoters_tbl | Extract genomic features from src_organism objects |
| PrositeFilter | Filtering src_organism objects |
| RefseqFilter | Filtering src_organism objects |
| select-method | Using the "select" interface on src_organism objects |
| select_.tbl_organism | Create a sqlite database from TxDb and corresponding Org packages |
| select_tbl | Using the "select" interface on src_organism objects |
| seqinfo-method | Create a sqlite database from TxDb and corresponding Org packages |
| show-method | Filtering src_organism objects |
| src_organism | Create a sqlite database from TxDb and corresponding Org packages |
| src_tbls.src_organism | Create a sqlite database from TxDb and corresponding Org packages |
| src_ucsc | Create a sqlite database from TxDb and corresponding Org packages |
| supportedFilters | Filtering src_organism objects |
| supportedOrganisms | Create a sqlite database from TxDb and corresponding Org packages |
| SymbolFilter | Filtering src_organism objects |
| tbl.src_organism | Create a sqlite database from TxDb and corresponding Org packages |
| threeUTRsByTranscript-method | Extract genomic features from src_organism objects |
| threeUTRsByTranscript_tbl | Extract genomic features from src_organism objects |
| transcripts-method | Extract genomic features from src_organism objects |
| transcriptsBy-method | Extract genomic features from src_organism objects |
| transcriptsBy_tbl | Extract genomic features from src_organism objects |
| transcripts_tbl | Extract genomic features from src_organism objects |
| TxChromFilter | Filtering src_organism objects |
| TxEndFilter | Filtering src_organism objects |
| TxIdFilter | Filtering src_organism objects |
| TxNameFilter | Filtering src_organism objects |
| TxStartFilter | Filtering src_organism objects |
| TxStrandFilter | Filtering src_organism objects |
| TxTypeFilter | Filtering src_organism objects |
| UnigeneFilter | Filtering src_organism objects |
| UniprotFilter | Filtering src_organism objects |
| WormbaseFilter | Filtering src_organism objects |
| ZfinFilter | Filtering src_organism objects |