| AllEvents_RNASeq | Alternative splicing events detected by EventPointer |
| ArraysData | Preprocessed arrays data |
| CDFfromGTF | CDF file creation for EventPointer |
| EventDetection | Detect splicing events using EventPointer methodology |
| EventPointer | EventPointer |
| EventPointer_IGV | EventPointer IGV Visualization |
| EventPointer_RNASeq | Statistical analysis of alternative splcing events for RNASeq data |
| EventPointer_RNASeq_IGV | EventPointer RNASeq IGV Visualization |
| PrepareBam_EP | Bam files preparation for EventPointer |
| SG_RNASeq | Splicing graph elements predicted from BAM files |