Detection of focal aberrations in DNA copy number data

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Documentation for package ‘focalCall’ version 1.8.0

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BierkensCNA Cervical cancer arrayCGH data
calls_focals Cervical cancer arrayCGH data
CGHset Cervical cancer arrayCGH data
CNVset Cervical cancer arrayCGH data
focalCall Detection genomic focal aberrations
FreqPlot frequency plot copy number aberrations.
FreqPlotfocal frequency plot focal copy number aberrations.
igvFiles Match Ensembl genes to focal aberrations.
singleSample Detection focal aberrations with 1 sample only