# Generated by roxygen2 (4.1.0): do not edit by hand

S3method(countsTable,MIMOSAResultList)
S3method(fdr,MIMOSAResult)
S3method(fdr,MIMOSAResultList)
S3method(fdr,matrix)
S3method(getW,MIMOSAResult)
S3method(getW,MIMOSAResultList)
S3method(getZ,MIMOSAResult)
S3method(getZ,MIMOSAResultList)
S3method(pData,MIMOSAResultList)
S3method(print,MIMOSAResultList)
S3method(volcanoPlot,MIMOSAResultList)
export(ConstructMIMOSAExpressionSet)
export(MIMOSA)
export(MIMOSAExpressionSet)
export(asinh_trans)
export(boxplotMIMOSAResultList)
export(combine.MIMOSA)
export(countsTable)
export(fdr)
export(getW)
export(getZ)
export(volcanoPlot)
import(Formula)
import(reshape)
import(scales)
import(testthat)
importClassesFrom(methods,array)
importClassesFrom(methods,character)
importClassesFrom(methods,data.frame)
importClassesFrom(methods,factor)
importClassesFrom(methods,integer)
importClassesFrom(methods,matrix)
importClassesFrom(methods,numeric)
importFrom(Kmisc,wrap)
importFrom(MASS,ginv)
importFrom(MCMCpack,rdirichlet)
importFrom(Rcpp,evalCpp)
importFrom(coda,mcmc)
importFrom(data.table,data.table)
importFrom(data.table,key)
importFrom(data.table,rbindlist)
importFrom(data.table,setnames)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme_bw)
importFrom(methods,new)
importFrom(modeest,mlv)
importFrom(plyr,ddply)
importFrom(pracma,grad)
importFrom(pracma,hessian)
importMethodsFrom(Biobase,pData)
useDynLib(MIMOSA, .registration=TRUE)
