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| IVAS-package | IVAS : Identification of genomic variants affecting Alternative Splicing |
| calSignificant | Calculates P.values by using two statistical models. |
| chrseparate | Separate a TranscriptDb object based on a chromosome. |
| findAlternative | Find alternative exons of a gene. |
| findOversnp | Find SNPs which belongs to alternative exons and flanking introns of them. |
| IVAS | IVAS : Identification of genomic variants affecting Alternative Splicing |
| MsqtlFinder | Find SQTLs in multiple genes. |
| sampleexp | CEU expression data |
| samplesnp | CEU genotype data |
| samplesnplocus | snplocus |
| saveBplot | Save boxplots |
| sqtlfinder | Find SQTLs. |