GenVisR-package	GenVisR
brcaMAF	brcaMAF
cnFreq	cnFreq
cnFreq_buildMain	cnFreq_buildMain
cnFreq_qual	cnFreq_qual
cnSpec	cnSpec
cnSpec_buildMain	cnSpec_buildMain
cnSpec_qual	cnSpec_qual
cnView	cnView
cnView_buildMain	cnView_buildMain
cnView_qual	cnView_qual
compIdent	compIdent
compIdent_bamRcnt	compIdent_bamRcnt
compIdent_bamRcnt_qual	compIdent_bamRcnt_qual
compIdent_buildMain	compIdent_buildMain
compIdent_format	compIdent_format
covBars	covBars
covBars_buildMain	covBars_buildMain
covBars_qual	covBars_qual
cytoGeno	cytoGeno
genCov	genCov
genCov_alignPlot	genCov_alignPlot
genCov_assign_ggplotGrob_height	genCov_assign_ggplotGrob_height
genCov_assign_ggplotGrob_width	genCov_assign_ggplotGrob_width
genCov_buildCov	genCov_buildCov
genCov_buildTrack	genCov_buildTrack
genCov_extr_ggplotGrob_height	genCov_extr_ggplotGrob_height
genCov_extr_ggplotGrob_width	genCov_extr_ggplotGrob_width
genCov_qual	genCov_qual
genCov_trackViz	genCov_trackViz
geneViz	geneViz
geneViz_buildGene	geneViz_buildGene
geneViz_calcGC	geneViz_calcGC
geneViz_cdsFromTXID	geneViz_cdsFromTXID
geneViz_extrCDS	geneViz_extrCDS
geneViz_extrUTR	geneViz_extrUTR
geneViz_formatCDS	geneViz_formatCDS
geneViz_formatUTR	geneViz_formatUTR
geneViz_Granges2dataframe	geneViz_Granges2dataframe
geneViz_mapCoordSpace	geneViz_mapCoordSpace
geneViz_mapCovCoordSpace	geneViz_mapCovCoordSpace
geneViz_mergeRegions	geneViz_mergeRegions
geneViz_mergeTypeRegions	geneViz_mergeTypeRegions
geneViz_mergeTypes	geneViz_mergeTypes
GenVisR	GenVisR
HCC1395_Germline	HCC1395_Germline
HCC1395_N	HCC1395_N
HCC1395_T	HCC1395_T
hg19chr	hg19chr
ideoView	ideoView
ideoView_buildMain	ideoView_buildMain
ideoView_formatCytobands	ideoView_formatCytobands
ideoView_qual	ideoView_qual
lohSpec	lohSpec
lohSpec_buildMain	lohSpec_buildMain
lohSpec_fileGlob	lohSpec_fileGlob
lohSpec_lohCalc	lohSpec_lohCalc
lohSpec_qual	lohSpec_qual
lohSpec_slidingWindow	lohSpec_slidingWindow
lohSpec_stepCalc	lohSpec_stepCalc
lohSpec_tileCalc	lohSpec_tileCalc
lohSpec_tilePosition	lohSpec_tilePosition
lohSpec_tileWindow	lohSpec_tileWindow
lohSpec_windowPosition	lohSpec_windowPosition
lohView	lohView
lohView_buildMain	lohView_buildMain
lohView_qual	lohView_qual
lolliplot	lolliplot
lolliplot_AA2sidechain	lolliplot_AA2sidechain
lolliplot_buildMain	lolliplot_buildMain
lolliplot_Codon2AA	lolliplot_Codon2AA
lolliplot_constructGene	lolliplot_constructGene
lolliplot_DNAconv	lolliplot_DNAconv
lolliplot_dodgeCoordX	lolliplot_dodgeCoordX
lolliplot_dodgeCoordY	lolliplot_dodgeCoordY
lolliplot_fetchDomain	lolliplot_fetchDomain
lolliplot_mutationObs	lolliplot_mutationObs
lolliplot_qual	lolliplot_qual
lolliplot_reduceLolli	lolliplot_reduceLolli
lolliplot_transcriptID2codingSeq	lolliplot_transcriptID2codingSeq
LucCNseg	LucCNseg
multi_align	multi_align
multi_buildClin	multi_buildClin
multi_chrBound	multi_chrBound
multi_cytobandRet	multi_cytobandRet
multi_selectOut	multi_selectOut
multi_subsetChr	multi_subsetChr
SNPloci	SNPloci
TvTi	TvTi
TvTi_alignPlot	TvTi_alignPlot
TvTi_annoTransTranv	TvTi_annoTransTranv
TvTi_buildMain	TvTi_buildMain
TvTi_calcTransTranvFreq	TvTi_calcTransTranvFreq
TvTi_convMAF	TvTi_convMAF
TvTi_convMaf	TvTi_convMAF
TvTi_qual	TvTi_qual
TvTi_rmIndel	TvTi_rmIndel
TvTi_rmMnuc	TvTi_rmMnuc
waterfall	waterfall
waterfall_align	waterfall_align
waterfall_buildGenePrevelance	waterfall_buildGenePrevelance
waterfall_buildMain	waterfall_buildMain
waterfall_buildMutBurden_A	waterfall_buildMutBurden_A
waterfall_buildMutBurden_B	waterfall_buildMutBurden_B
waterfall_build_proportions	waterfall_build_proportions
waterfall_calcMutFreq	waterfall_calcMutFreq
waterfall_Custom2anno	waterfall_Custom2anno
waterfall_geneAlt	waterfall_geneAlt
waterfall_geneRecurCutoff	waterfall_geneRecurCutoff
waterfall_geneSort	waterfall_geneSort
waterfall_hierarchyTRV	waterfall_hierarchyTRV
waterfall_MAF2anno	waterfall_MAF2anno
waterfall_MGI2anno	waterfall_MGI2anno
waterfall_NA2gene	waterfall_NA2gene
waterfall_palette_names	waterfall_palette_names
waterfall_qual	waterfall_qual
waterfall_rmvSilent	waterfall_rmvSilent
waterfall_sampAlt	waterfall_sampAlt
waterfall_sampSort	waterfall_sampSort
waterfall_select_palette	waterfall_select_palette
