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| createReport | Create report of RNAseq DEG anlaysis |
| degBI | Get the estimates of the fold change (FC) mean from a FC distribution using bayesian inference |
| degBIcmd | Apply bayesian inference to estimate the average fold change (FC) of a distribution |
| degComb | Get random combinations of two groups |
| degFC | get the FC for each gene between two groups |
| degMB | Distribution of expression of DE genes compared to the background |
| degMean | Distribution of pvalues by expression range |
| degMerge | Integrate data comming from degPattern into one data object |
| degMV | Correlation of the standard desviation and the mean of the abundance of a set of genes. |
| degNcomb | Get number of potential combinations of two vectors |
| degObj | Create a deg object that can be used to plot expression values at shiny server:runGist(9930881) |
| degPatterns | Make groups of genes using expression profile |
| degPlot | Plot top genes allowing more variables to color and shape points |
| degPR | plot the correlation between the rank according estimator and the rank according FC |
| degRank | Get rank data frame with best score on the top |
| DEGreportSet | List of process geuvadis data to test the package |
| degResults | Complete report from DESeq2 analysis |
| degVar | Distribution of pvalues by standard desviation range |
| degVB | Distribution of the standard desviation of DE genes compared to the background |
| degVolcano | Create volcano plot from log2FC and adjusted pvalues data frame |
| geneInfo | data.frame with chromose information for each gene |
| humanSexDEedgeR | DGEList object for DE genes betwen Male and Females |
| show_deseq2_results | Complete report from DESeq2 analysis |