bambaf_from_vcf	bambaf_from_vcf
bed_generator	bed_generator
chr	chr
filenm	filenm
get_array_input	get_array_input
iCNV_detection	iCNV_detection
icnv_output_to_gb	icnv_output_to_gb
icnv_res0	icnv_res0
ngs_baf	ngs_baf
ngs_baf.chr	ngs_baf.chr
ngs_baf.id	ngs_baf.id
ngs_baf.nm	ngs_baf.nm
ngs_baf.pos	ngs_baf.pos
ngs_plr	ngs_plr
ngs_plr.pos	ngs_plr.pos
normObj	normObj
output_list	output_list
plotHMMscore	plotHMMscore
plotindi	plotindi
plot_intensity	plot_intensity
projname	projname
qcObj	qcObj
sampname	sampname
sampname_qc	sampname_qc
snp_baf	snp_baf
snp_baf.pos	snp_baf.pos
snp_lrr	snp_lrr
snp_lrr.pos	snp_lrr.pos
